RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 SLC17A8Q8NDX2 589 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 CAGE1Q8TC20 777 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 DHX38Q92620 1227 aaKnown RBP17.89■□□□□ 0.45
LIMS2-216ENST00000494613 GPRASP2Q96D09 838 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 PBX4Q9BYU1 374 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 FTOQ9C0B1 505 aaKnown RBP eCLIP17.89■□□□□ 0.45
LIMS2-216ENST00000494613 ZSWIM6Q9HCJ5 1215 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 SLC4A7Q9Y6M7 1214 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 FOSP01100 380 aaPredicted RBP17.88■□□□□ 0.45
LIMS2-216ENST00000494613 LGALS2P05162 132 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 PFKMP08237 780 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 CKBP12277 381 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 PTK7Q13308 1070 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 RUFY3Q7L099 469 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 CCDC155Q8N6L0 562 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 GIMAP8Q8ND71 665 aaPredicted RBP17.88■□□□□ 0.45
LIMS2-216ENST00000494613 TIFAQ96CG3 184 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 RNPEPQ9H4A4 650 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 ZNF576Q9H609 170 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 JADE2Q9NQC1 790 aa17.88■□□□□ 0.45
LIMS2-216ENST00000494613 COL6A3P12111 3177 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 TMEM265A0A087WTH1 108 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 hCG_1984214I3L0E3 225 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 PRPF3O43395 683 aaKnown RBP17.87■□□□□ 0.45
LIMS2-216ENST00000494613 SELPP16109 830 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 PDIA3P30101 505 aaKnown RBP17.87■□□□□ 0.45
LIMS2-216ENST00000494613 ADCY7P51828 1080 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 EVCP57679 992 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 SP4Q02446 784 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 GRIN2CQ14957 1233 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 PFKFB3Q16875 520 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-216ENST00000494613 UTP14CQ5TAP6 766 aaKnown RBP17.87■□□□□ 0.45
LIMS2-216ENST00000494613 TEX2Q8IWB9 1127 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 ZNF713Q8N859 430 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-216ENST00000494613 CYP2W1Q8TAV3 490 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 AFAP1L1Q8TED9 768 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 CDHR1Q96JP9 859 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 MXRA8Q9BRK3 442 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 EHMT1Q9H9B1 1298 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 TMEM260Q9NX78 707 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 MSRAQ9UJ68 235 aa17.87■□□□□ 0.45
LIMS2-216ENST00000494613 ZBBXA8MT70 800 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 ACTN1P12814 892 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 SCG2P13521 617 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 KCNA2P16389 499 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 RBL2Q08999 1139 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 MTMR1Q13613 665 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 NTRK3Q16288 839 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 PKN1Q16512 942 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 TRIM71Q2Q1W2 868 aaKnown RBP17.86■□□□□ 0.45
LIMS2-216ENST00000494613 PPP1R18Q6NYC8 613 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 MYLIPQ8WY64 445 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 SEPT1Q8WYJ6 367 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 WNT8BQ93098 351 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 PGBD1Q96JS3 809 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 GLT8D2Q9H1C3 349 aa17.86■□□□□ 0.45
LIMS2-216ENST00000494613 GSTTP1A0A1W2PQM5 241 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 C17orf102A2RUQ5 167 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 SMIM10L2AP0DMW4 78 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 SMIM10L2BP0DMW5 78 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 CLK2P49760 499 aaKnown RBP17.85■□□□□ 0.45
LIMS2-216ENST00000494613 RABGGTBP53611 331 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 CCT2P78371 535 aaKnown RBP17.85■□□□□ 0.45
LIMS2-216ENST00000494613 TOB2Q14106 344 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-216ENST00000494613 ZNF618Q5T7W0 954 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 LRRC8DQ7L1W4 858 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 ATP6V0A1Q93050 837 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 PHKBQ93100 1093 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 LARP6Q9BRS8 491 aaKnown RBP17.85■□□□□ 0.45
LIMS2-216ENST00000494613 TM6SF1Q9BZW5 370 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 KCNH7Q9NS40 1196 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 SETD4Q9NVD3 440 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 PKD2L1Q9P0L9 805 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 CYP46A1Q9Y6A2 500 aa17.85■□□□□ 0.45
LIMS2-216ENST00000494613 TRIP12Q14669 1992 aaPredicted RBP17.84■□□□□ 0.45
LIMS2-216ENST00000494613 ADAMTS3O15072 1205 aa17.84■□□□□ 0.45
LIMS2-216ENST00000494613 TREHO43280 583 aa17.84■□□□□ 0.45
LIMS2-216ENST00000494613 PPFIA3O75145 1194 aa17.84■□□□□ 0.45
LIMS2-216ENST00000494613 PARNO95453 639 aaKnown RBP17.84■□□□□ 0.45
LIMS2-216ENST00000494613 ARP10275 920 aa17.84■□□□□ 0.45
LIMS2-216ENST00000494613 ATP2A2P16615 1042 aaKnown RBP17.84■□□□□ 0.45
LIMS2-216ENST00000494613 RAB30Q15771 203 aa17.84■□□□□ 0.45
LIMS2-216ENST00000494613 JAKMIP3Q5VZ66 844 aa17.84■□□□□ 0.45
LIMS2-216ENST00000494613 SERINC5Q86VE9 423 aa17.84■□□□□ 0.45
LIMS2-216ENST00000494613 ANO3Q9BYT9 981 aa17.84■□□□□ 0.45
LIMS2-216ENST00000494613 NCOA5Q9HCD5 579 aaKnown RBP17.84■□□□□ 0.45
LIMS2-216ENST00000494613 YBX2Q9Y2T7 364 aaKnown RBP17.84■□□□□ 0.45
LIMS2-216ENST00000494613 MEIS1O00470 390 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 NBNO60934 754 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 GNAT1P11488 350 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 MYOGP15173 224 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 HOXC8P31273 242 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 TCF7P36402 384 aaPredicted RBP17.83■□□□□ 0.44
LIMS2-216ENST00000494613 AKAP17AQ02040 695 aaKnown RBP17.83■□□□□ 0.44
LIMS2-216ENST00000494613 CEP55Q53EZ4 464 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 TRAF7Q6Q0C0 670 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 TRIM50Q86XT4 487 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 PHOSPHO2Q8TCD6 241 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 ZMYND12Q9H0C1 365 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 NKX2-4Q9H2Z4 354 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms