RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 LGALS2P05162 132 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 ERVK-21P61565 698 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 ARHGAP4P98171 946 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 RBL2Q08999 1139 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 HIC1Q14526 733 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 MBTPS1Q14703 1052 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 GRM4Q14833 912 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 SEC23AQ15436 765 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 PTPROQ16827 1216 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 TRIM71Q2Q1W2 868 aaKnown RBP11.13□□□□□ -0.63
UBR4-216ENST00000494503 TMEM31Q5JXX7 168 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 STOX1Q6ZVD7 989 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 CYFIP1Q7L576 1253 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 SERINC5Q86VE9 423 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 TRIM50Q86XT4 487 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 RUFY2Q8WXA3 655 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 IL25Q9H293 177 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 UBE2ZQ9H832 354 aaPredicted RBP11.13□□□□□ -0.63
UBR4-216ENST00000494503 MAP3K20Q9NYL2 800 aaKnown RBP11.13□□□□□ -0.63
UBR4-216ENST00000494503 SEC63Q9UGP8 760 aaKnown RBP11.13□□□□□ -0.63
UBR4-216ENST00000494503 ZNF215Q9UL58 517 aaPredicted RBP11.13□□□□□ -0.63
UBR4-216ENST00000494503 MYO7AQ13402 2215 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 PALM3A6NDB9 673 aaPredicted RBP11.12□□□□□ -0.63
UBR4-216ENST00000494503 TGFB3P10600 412 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 GNAT1P11488 350 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 PLA2G5P39877 138 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 NEDD9Q14511 834 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 NFXL1Q6ZNB6 911 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 NCOA7Q8NI08 942 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 UIMC1Q96RL1 719 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 C16orf70Q9BSU1 422 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 IFIH1Q9BYX4 1025 aaKnown RBP11.12□□□□□ -0.63
UBR4-216ENST00000494503 SENP2Q9HC62 589 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 SETD4Q9NVD3 440 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 PKD2L1Q9P0L9 805 aa11.12□□□□□ -0.63
UBR4-216ENST00000494503 H3BQ06 376 aaPredicted RBP11.11□□□□□ -0.63
UBR4-216ENST00000494503 FIBPO43427 364 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 CYP21A2P08686 494 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 IBSPP21815 317 aaPredicted RBP11.11□□□□□ -0.63
UBR4-216ENST00000494503 MARK3P27448 753 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 GPM6BQ13491 265 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 TTC22Q5TAA0 569 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 PTCRAQ6ISU1 281 aaPredicted RBP11.11□□□□□ -0.63
UBR4-216ENST00000494503 TRAF7Q6Q0C0 670 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 CTCFLQ8NI51 663 aaPredicted RBP11.11□□□□□ -0.63
UBR4-216ENST00000494503 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
UBR4-216ENST00000494503 LRFN3Q9BTN0 628 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 MYL10Q9BUA6 226 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 BCAS3Q9H6U6 928 aa11.11□□□□□ -0.63
UBR4-216ENST00000494503 E7EWF7 191 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 CYTH3O43739 400 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 HOXD8P13378 290 aaPredicted RBP11.1□□□□□ -0.63
UBR4-216ENST00000494503 IL9P15248 144 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 CTNNB1P35222 781 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 PTH1RQ03431 593 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 EPC2Q52LR7 807 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 TIGD5Q53EQ6 642 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 PLEKHG4Q58EX7 1191 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 CASC1Q6TDU7 716 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 NLRX1Q86UT6 975 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 MTMR8Q96EF0 704 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 RIOX1Q9H6W3 641 aa11.1□□□□□ -0.63
UBR4-216ENST00000494503 STAM2O75886 525 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 GHRP10912 638 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 GSPT1P15170 499 aaKnown RBP11.09□□□□□ -0.63
UBR4-216ENST00000494503 KIF5BP33176 963 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 IGBP1P78318 339 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 MRPS9P82933 396 aaKnown RBP11.09□□□□□ -0.63
UBR4-216ENST00000494503 GHRHRQ02643 423 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 SLC35G1Q2M3R5 365 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 GJD3Q8N144 294 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 BANK1Q8NDB2 785 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 LMBR1Q8WVP7 490 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 GLG1Q92896 1179 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 KHSRPQ92945 711 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBR4-216ENST00000494503 MRPL38Q96DV4 380 aaKnown RBP11.09□□□□□ -0.63
UBR4-216ENST00000494503 SAMD11Q96NU1 681 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 GPR20Q99678 358 aa11.09□□□□□ -0.63
UBR4-216ENST00000494503 SUPT16HQ9Y5B9 1047 aaKnown RBP11.09□□□□□ -0.63
UBR4-216ENST00000494503 RALGAPA2Q2PPJ7 1873 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 CCDC69A6NI79 296 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 SPATA31C2B4DYI2 1134 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 CAND2O75155 1236 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 RXRAP19793 462 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 PDE4AP27815 886 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 TCF7P36402 384 aaPredicted RBP11.08□□□□□ -0.64
UBR4-216ENST00000494503 HTRA4P83105 476 aaPredicted RBP11.08□□□□□ -0.64
UBR4-216ENST00000494503 TROAPQ12815 778 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 PPFIA1Q13136 1202 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 CLUL1Q15846 466 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 LEXMQ3ZCV2 418 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms