RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 MRFAP1Q9Y605 127 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 SLC12A8A0AV02 714 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 KCNK3O14649 394 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 TBC1D8O95759 1140 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 IL33O95760 270 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 RBP3P10745 1247 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 YBX3P16989 372 aaKnown RBP eCLIP5.41□□□□□ -1.543e-9■■■□□ 15.9
CMSS1-207ENST00000494412 SLC9A1P19634 815 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 LTKP29376 864 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 IRF9Q00978 393 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 SAFB2Q14151 953 aaKnown RBP eCLIP5.41□□□□□ -1.54
CMSS1-207ENST00000494412 ZNF174Q15697 407 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 CLUL1Q15846 466 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 MSMPQ1L6U9 139 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 TMEM240Q5SV17 173 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 OTOP1Q7RTM1 612 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 OSTM1Q86WC4 334 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 CMIPQ8IY22 773 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 USP33Q8TEY7 942 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 TIFAQ96CG3 184 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 JAM3Q9BX67 310 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 TCF7L1Q9HCS4 588 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 ZFP64Q9NPA5 681 aa5.41□□□□□ -1.54
CMSS1-207ENST00000494412 C7orf72A4D263 438 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 GOLGA8AA7E2F4 631 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 GOLGA8BA8MQT2 603 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 KIAA1324LA8MWY0 1029 aaPredicted RBP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 H3BS24 57 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 ZNF561-AS1K7EIQ3 104 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 CREB3O43889 395 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 NPHS1O60500 1241 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 H2AFYO75367 372 aaKnown RBP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 LTFP02788 710 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 NBPF7P0C2Y1 421 aaPredicted RBP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 GNAT1P11488 350 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 SPINK2P20155 84 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 ENDOUP21128 410 aaKnown RBP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 CYP2C19P33261 490 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 GTF2A2P52657 109 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 JAM2P57087 298 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 LACTBP83111 547 aaPredicted RBP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 LRRC32Q14392 662 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 ODF1Q14990 250 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 TERF2Q15554 542 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 CPSF6Q16630 551 aaKnown RBP eCLIP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 ARHGAP29Q52LW3 1261 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 INTS5Q6P9B9 1019 aaKnown RBP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 ZPBP2Q6X784 338 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 RNF111Q6ZNA4 994 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 TSHZ1Q6ZSZ6 1077 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 AMOTL1Q8IY63 956 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 KIAA1958Q8N8K9 716 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 HSPBAP1Q96EW2 488 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 SLC39A13Q96H72 371 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 MS4A5Q9H3V2 200 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 PCIF1Q9H4Z3 704 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 SMURF1Q9HCE7 757 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 TOPORSQ9NS56 1045 aaPredicted RBP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 TOMM22Q9NS69 142 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 DUSP13Q9UII6 198 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 RCAN3Q9UKA8 241 aa5.4□□□□□ -1.54
CMSS1-207ENST00000494412 NOC2LQ9Y3T9 749 aaKnown RBP5.4□□□□□ -1.54
CMSS1-207ENST00000494412 PCDHGA12O60330 932 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 COL6A2P12110 1019 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 LSP1P33241 339 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 OXCT1P55809 520 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PURAQ00577 322 aaKnown RBP5.39□□□□□ -1.55
CMSS1-207ENST00000494412 ACAP2Q15057 778 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 GPR19Q15760 415 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 NKPD1Q17RQ9 610 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 XP32Q5T750 250 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 EFCAB2Q5VUJ9 269 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 CYP2R1Q6VVX0 501 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 ARHGAP36Q6ZRI8 547 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 EP400NLQ6ZTU2 488 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 CEP68Q76N32 757 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 WAPLQ7Z5K2 1190 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 NLRP10Q86W26 655 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 RASSF3Q86WH2 238 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PTRH1Q86Y79 214 aaKnown RBP5.39□□□□□ -1.55
CMSS1-207ENST00000494412 CMTR2Q8IYT2 770 aaKnown RBP5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PLD6Q8N2A8 252 aaKnown RBP5.39□□□□□ -1.55
CMSS1-207ENST00000494412 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 UBE2FQ969M7 185 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 TMEM169Q96HH4 297 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 HSPA12BQ96MM6 686 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 ELF4Q99607 663 aaPredicted RBP5.39□□□□□ -1.55
CMSS1-207ENST00000494412 ZNF700Q9H0M5 742 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 CDIP1Q9H305 208 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 ANLNQ9NQW6 1124 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 INVSQ9Y283 1065 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PCDHGA9Q9Y5G4 932 aaKnown RBP5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PCDHGA8Q9Y5G5 932 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PCDHGA7Q9Y5G6 932 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PCDHGA6Q9Y5G7 932 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PCDHGA3Q9Y5H0 932 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PCDHGA2Q9Y5H1 932 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 PCDHA11Q9Y5I1 949 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 SPO11Q9Y5K1 396 aa5.39□□□□□ -1.55
CMSS1-207ENST00000494412 KLHL33A6NCF5 533 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms