RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 PPIGQ13427 754 aaKnown RBP eCLIP25.03■■□□□ 1.6
HPS3-207ENST00000494327 ANKRD1Q15327 319 aa25.03■■□□□ 1.6
HPS3-207ENST00000494327 PTGISQ16647 500 aa25.03■■□□□ 1.6
HPS3-207ENST00000494327 MXRA8Q9BRK3 442 aa25.03■■□□□ 1.6
HPS3-207ENST00000494327 HDAC6Q9UBN7 1215 aa25.03■■□□□ 1.6
HPS3-207ENST00000494327 TELO2Q9Y4R8 837 aa25.03■■□□□ 1.6
HPS3-207ENST00000494327 SLC34A2O95436 690 aa25.02■■□□□ 1.6
HPS3-207ENST00000494327 ACRP10323 421 aa25.02■■□□□ 1.6
HPS3-207ENST00000494327 SCRN1Q12765 414 aa25.02■■□□□ 1.6
HPS3-207ENST00000494327 GDF6Q6KF10 455 aaPredicted RBP25.02■■□□□ 1.6
HPS3-207ENST00000494327 GIMAP8Q8ND71 665 aaPredicted RBP25.02■■□□□ 1.6
HPS3-207ENST00000494327 CCDC148Q8NFR7 591 aa25.02■■□□□ 1.6
HPS3-207ENST00000494327 CYP2W1Q8TAV3 490 aa25.02■■□□□ 1.6
HPS3-207ENST00000494327 GPR20Q99678 358 aa25.02■■□□□ 1.6
HPS3-207ENST00000494327 C16orf70Q9BSU1 422 aa25.02■■□□□ 1.6
HPS3-207ENST00000494327 MYH7BA7E2Y1 1941 aa25.02■■□□□ 1.6
HPS3-207ENST00000494327 HAS3O00219 553 aa25.01■■□□□ 1.59
HPS3-207ENST00000494327 LGALS2P05162 132 aa25.01■■□□□ 1.59
HPS3-207ENST00000494327 KCNA2P16389 499 aa25.01■■□□□ 1.59
HPS3-207ENST00000494327 SREBF1P36956 1147 aa25.01■■□□□ 1.59
HPS3-207ENST00000494327 NEK4P51957 841 aa25.01■■□□□ 1.59
HPS3-207ENST00000494327 NLRP5P59047 1200 aa25.01■■□□□ 1.59
HPS3-207ENST00000494327 C8orf34Q49A92 452 aa25.01■■□□□ 1.59
HPS3-207ENST00000494327 UTP14CQ5TAP6 766 aaKnown RBP25.01■■□□□ 1.59
HPS3-207ENST00000494327 REXO1Q8N1G1 1221 aaKnown RBP25.01■■□□□ 1.59
HPS3-207ENST00000494327 RNPC3Q96LT9 517 aaKnown RBP25.01■■□□□ 1.59
HPS3-207ENST00000494327 RANBP2P49792 3224 aaKnown RBP25.01■■□□□ 1.59
HPS3-207ENST00000494327 SCN10AQ9Y5Y9 1956 aa25.01■■□□□ 1.59
HPS3-207ENST00000494327 H3BRB1 525 aa25■■□□□ 1.59
HPS3-207ENST00000494327 MAFGO15525 162 aa25■■□□□ 1.59
HPS3-207ENST00000494327 DTNBO60941 627 aa25■■□□□ 1.59
HPS3-207ENST00000494327 DEXIO95424 95 aa25■■□□□ 1.59
HPS3-207ENST00000494327 ARHGAP4P98171 946 aa25■■□□□ 1.59
HPS3-207ENST00000494327 SESTD1Q86VW0 696 aa25■■□□□ 1.59
HPS3-207ENST00000494327 BICD2Q8TD16 824 aa25■■□□□ 1.59
HPS3-207ENST00000494327 RASGRP4Q8TDF6 673 aa25■■□□□ 1.59
HPS3-207ENST00000494327 SCLYQ96I15 445 aa25■■□□□ 1.59
HPS3-207ENST00000494327 WNT8AQ9H1J5 351 aa25■■□□□ 1.59
HPS3-207ENST00000494327 TUT1Q9H6E5 874 aaKnown RBP25■■□□□ 1.59
HPS3-207ENST00000494327 KCNH7Q9NS40 1196 aa25■■□□□ 1.59
HPS3-207ENST00000494327 GTF2IRD1Q9UHL9 959 aa25■■□□□ 1.59
HPS3-207ENST00000494327 PFKFB2O60825 505 aa24.99■■□□□ 1.59
HPS3-207ENST00000494327 ARP10275 920 aa24.99■■□□□ 1.59
HPS3-207ENST00000494327 CEP55Q53EZ4 464 aa24.99■■□□□ 1.59
HPS3-207ENST00000494327 C16orf59Q7L2K0 433 aa24.99■■□□□ 1.59
HPS3-207ENST00000494327 IL17RAQ96F46 866 aa24.99■■□□□ 1.59
HPS3-207ENST00000494327 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.99■■□□□ 1.59
HPS3-207ENST00000494327 SH3GLB2Q9NR46 395 aa24.99■■□□□ 1.59
HPS3-207ENST00000494327 CDKL5O76039 1030 aa24.98■■□□□ 1.59
HPS3-207ENST00000494327 MCTP2Q6DN12 878 aa24.98■■□□□ 1.59
HPS3-207ENST00000494327 TRIM50Q86XT4 487 aa24.98■■□□□ 1.59
HPS3-207ENST00000494327 RETREG2Q8NC44 543 aa24.98■■□□□ 1.59
HPS3-207ENST00000494327 AIFM3Q96NN9 605 aa24.98■■□□□ 1.59
HPS3-207ENST00000494327 IL23AQ9NPF7 189 aa24.98■■□□□ 1.59
HPS3-207ENST00000494327 TCF7P36402 384 aaPredicted RBP24.97■■□□□ 1.59
HPS3-207ENST00000494327 ZNF200P98182 395 aaPredicted RBP24.97■■□□□ 1.59
HPS3-207ENST00000494327 TMEM240Q5SV17 173 aa24.97■■□□□ 1.59
HPS3-207ENST00000494327 ZNF365Q70YC5 407 aa24.97■■□□□ 1.59
HPS3-207ENST00000494327 NECAB1Q8N987 351 aa24.97■■□□□ 1.59
HPS3-207ENST00000494327 SEPT1Q8WYJ6 367 aa24.97■■□□□ 1.59
HPS3-207ENST00000494327 MEIS1O00470 390 aa24.96■■□□□ 1.59
HPS3-207ENST00000494327 BFSP2Q13515 415 aa24.96■■□□□ 1.59
HPS3-207ENST00000494327 PLA2G4DQ86XP0 818 aa24.96■■□□□ 1.59
HPS3-207ENST00000494327 SDF4Q9BRK5 362 aa24.96■■□□□ 1.59
HPS3-207ENST00000494327 ZNF215Q9UL58 517 aaPredicted RBP24.96■■□□□ 1.59
HPS3-207ENST00000494327 GSTTP1A0A1W2PQM5 241 aa24.95■■□□□ 1.58
HPS3-207ENST00000494327 FAM86B1E9PN63 330 aa24.95■■□□□ 1.58
HPS3-207ENST00000494327 FGBP02675 491 aa24.95■■□□□ 1.58
HPS3-207ENST00000494327 FAM86B2P0C5J1 330 aa24.95■■□□□ 1.58
HPS3-207ENST00000494327 ME3Q16798 604 aa24.95■■□□□ 1.58
HPS3-207ENST00000494327 PSRC1Q6PGN9 363 aaPredicted RBP24.95■■□□□ 1.58
HPS3-207ENST00000494327 CCDC155Q8N6L0 562 aa24.95■■□□□ 1.58
HPS3-207ENST00000494327 UIMC1Q96RL1 719 aa24.95■■□□□ 1.58
HPS3-207ENST00000494327 CTAGE1Q96RT6 745 aa24.95■■□□□ 1.58
HPS3-207ENST00000494327 AGO4Q9HCK5 861 aaKnown RBP24.95■■□□□ 1.58
HPS3-207ENST00000494327 JPH1Q9HDC5 661 aaPredicted RBP24.95■■□□□ 1.58
HPS3-207ENST00000494327 C17orf102A2RUQ5 167 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 LARGE1O95461 756 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 CYP3A4P08684 503 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 SMIM10L2AP0DMW4 78 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 SMIM10L2BP0DMW5 78 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 HIC1Q14526 733 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 DEFB128Q7Z7B8 93 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 RPUSD2Q8IZ73 545 aaKnown RBP24.94■■□□□ 1.58
HPS3-207ENST00000494327 SLC9A2Q9UBY0 812 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 PCDHA4Q9UN74 947 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 DOCK5Q9H7D0 1870 aa24.94■■□□□ 1.58
HPS3-207ENST00000494327 DDX39AO00148 427 aaKnown RBP24.93■■□□□ 1.58
HPS3-207ENST00000494327 PITPNM1O00562 1244 aa24.93■■□□□ 1.58
HPS3-207ENST00000494327 IQCF3P0C7M6 154 aa24.93■■□□□ 1.58
HPS3-207ENST00000494327 ITGB3BPQ13352 177 aaPredicted RBP24.93■■□□□ 1.58
HPS3-207ENST00000494327 NIPA1Q7RTP0 329 aa24.93■■□□□ 1.58
HPS3-207ENST00000494327 CRYGNQ8WXF5 182 aa24.93■■□□□ 1.58
HPS3-207ENST00000494327 DHX38Q92620 1227 aaKnown RBP24.93■■□□□ 1.58
HPS3-207ENST00000494327 GLG1Q92896 1179 aa24.93■■□□□ 1.58
HPS3-207ENST00000494327 KCNJ14Q9UNX9 436 aa24.93■■□□□ 1.58
HPS3-207ENST00000494327 CTDNEP1O95476 244 aa24.92■■□□□ 1.58
HPS3-207ENST00000494327 PTK7Q13308 1070 aa24.92■■□□□ 1.58
HPS3-207ENST00000494327 OTOP2Q7RTS6 562 aa24.92■■□□□ 1.58
HPS3-207ENST00000494327 BLIDQ8IZY5 108 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms