RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 MBOAT7Q96N66 472 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 SPC25Q9HBM1 224 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 Q9Y3F1 56 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-208ENST00000493815 MNX1P50219 401 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-208ENST00000493815 NEDD9Q14511 834 aa20.27■□□□□ 0.84
PDLIM7-208ENST00000493815 MOXD1Q6UVY6 613 aa20.27■□□□□ 0.84
PDLIM7-208ENST00000493815 RNF180Q86T96 592 aa20.27■□□□□ 0.84
PDLIM7-208ENST00000493815 SENP7Q9BQF6 1050 aa20.27■□□□□ 0.84
PDLIM7-208ENST00000493815 FRMPD3Q5JV73 1810 aa20.27■□□□□ 0.83
PDLIM7-208ENST00000493815 LAMC2Q13753 1193 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 KCNA10Q16322 511 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 FAM173BQ6P4H8 233 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 METTL7BQ6UX53 244 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 ARRDC4Q8NCT1 418 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 KLHDC9Q8NEP7 349 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 DHX15O43143 795 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 GCFC2P16383 781 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 RESTQ13127 1097 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 TTC38Q5R3I4 469 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 ETNPPLQ8TBG4 499 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 SDF4Q9BRK5 362 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 NOL7Q9UMY1 257 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 PCDHB6Q9Y5E3 794 aa20.26■□□□□ 0.83
PDLIM7-208ENST00000493815 DOCK5Q9H7D0 1870 aa20.25■□□□□ 0.83
PDLIM7-208ENST00000493815 CAPN15O75808 1086 aa20.25■□□□□ 0.83
PDLIM7-208ENST00000493815 CCSAPQ6IQ19 270 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-208ENST00000493815 PPTC7Q8NI37 304 aa20.25■□□□□ 0.83
PDLIM7-208ENST00000493815 EMID1Q96A84 441 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-208ENST00000493815 FERMT2Q96AC1 680 aa20.25■□□□□ 0.83
PDLIM7-208ENST00000493815 JPH1Q9HDC5 661 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-208ENST00000493815 A6NJR5 290 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 KBTBD13C9JR72 458 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 DNM1LO00429 736 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 NEMFO60524 1076 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 ASGR1P07306 291 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 MMP3P08254 477 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 CPT1AP50416 773 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 GIMAP8Q8ND71 665 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 HAS1Q92839 578 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 NAP1L4Q99733 375 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 TMEM60Q9H2L4 133 aa20.24■□□□□ 0.83
PDLIM7-208ENST00000493815 NOP56O00567 594 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 CCNE2O96020 404 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 MYL3P08590 195 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 CST5P28325 142 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 TRAPPC10P48553 1259 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 NKX3-2P78367 333 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 CXCL17Q6UXB2 119 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 BRAPQ7Z569 592 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 SLC5A5Q92911 643 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 PAWRQ96IZ0 340 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 GPR20Q99678 358 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 KCNMB3Q9NPA1 279 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 SLC9A2Q9UBY0 812 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 DAXXQ9UER7 740 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 NFASCO94856 1347 aa20.23■□□□□ 0.83
PDLIM7-208ENST00000493815 ZNF286BP0CG31 522 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 ZSCAN22P10073 491 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 ACLYP53396 1101 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 FOXD4L6Q3SYB3 417 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 LRCH2Q5VUJ6 765 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 FOXD4L3Q6VB84 417 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 PPP1R13LQ8WUF5 828 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 CHMP2AO43633 222 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 MARCH6O60337 910 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 GAS7O60861 476 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 CALCRLQ16602 461 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 RILPL1Q5EBL4 403 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 PCSK9Q8NBP7 692 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 FTOQ9C0B1 505 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 SENP6Q9GZR1 1112 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 TBC1D22BQ9NU19 505 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 ZDHHC9Q9Y397 364 aa20.22■□□□□ 0.83
PDLIM7-208ENST00000493815 PSMD10O75832 226 aa20.21■□□□□ 0.83
PDLIM7-208ENST00000493815 CHMP4BP1P59074 171 aa20.21■□□□□ 0.83
PDLIM7-208ENST00000493815 ACTR2P61160 394 aa20.21■□□□□ 0.83
PDLIM7-208ENST00000493815 DGKDQ16760 1214 aa20.21■□□□□ 0.83
PDLIM7-208ENST00000493815 BRDTQ58F21 947 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-208ENST00000493815 TRIM50Q86XT4 487 aa20.21■□□□□ 0.83
PDLIM7-208ENST00000493815 A0A1W2PQ45 241 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 GSTTP1A0A1W2PQM5 241 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 A0A1W2PQY0 241 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 ZEB2O60315 1214 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 TCF7P36402 384 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 PSMC6P62333 389 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 PURAQ00577 322 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 UTP14CQ5TAP6 766 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 ANKLE1Q8NAG6 615 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 VTI1AQ96AJ9 217 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 FAM20AQ96MK3 541 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 MTMR9Q96QG7 549 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 RIT2Q99578 217 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 TEKT3Q9BXF9 490 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 UNC45AQ9H3U1 944 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 PHF24Q9UPV7 400 aa20.2■□□□□ 0.82
PDLIM7-208ENST00000493815 F13A1P00488 732 aa20.19■□□□□ 0.82
PDLIM7-208ENST00000493815 TXKP42681 527 aa20.19■□□□□ 0.82
PDLIM7-208ENST00000493815 ATN1P54259 1190 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-208ENST00000493815 PTGDRQ13258 359 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms