RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 ARVCFO00192 962 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 WNT9AO14904 365 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 NKRFO15226 690 aaKnown RBP eCLIP5.67□□□□□ -1.5
CD46-217ENST00000493796 LRG1P02750 347 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 NAT1P18440 290 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 SLURP1P55000 103 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 ITGA1P56199 1179 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 GUCY1A3Q02108 690 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 PAK1Q13153 545 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 SMAD4Q13485 552 aaKnown RBP5.67□□□□□ -1.5
CD46-217ENST00000493796 TEPPQ6URK8 271 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 SP8Q8IXZ3 490 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 KYQ8NBH2 561 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 TTLL11Q8NHH1 800 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 RAPGEFL1Q9UHV5 662 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 PCDHA8Q9Y5H6 950 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
CD46-217ENST00000493796 SMARCA5O60264 1052 aaPredicted RBP5.66□□□□□ -1.5
CD46-217ENST00000493796 SASH1O94885 1247 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 THBS2P35442 1172 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 STK32CQ86UX6 486 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 RBM12BQ8IXT5 1001 aaKnown RBP5.66□□□□□ -1.5
CD46-217ENST00000493796 TTLL6Q8N841 843 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 GSTCDQ8NEC7 633 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 PCDH19Q8TAB3 1148 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 CLEC4DQ8WXI8 215 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 MRFAP1L1Q96HT8 127 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 PDGFDQ9GZP0 370 aaPredicted RBP5.66□□□□□ -1.5
CD46-217ENST00000493796 ZSWIM4Q9H7M6 989 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 SLC52A2Q9HAB3 445 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 HSPBP1Q9NZL4 362 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 DSEQ9UL01 958 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 NUB1Q9Y5A7 615 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 PCDHA9Q9Y5H5 950 aa5.66□□□□□ -1.5
CD46-217ENST00000493796 EFCAB14O75071 495 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 CRTAMO95727 393 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 HOXA5P20719 270 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 KCNC1P48547 511 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 TUSC3Q13454 348 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 CCDC144BQ3MJ40 725 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 TRIM61Q5EBN2 209 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 TTLL7Q6ZT98 887 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 CARFQ8N187 725 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 SYT8Q8NBV8 401 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 SLC7A14Q8TBB6 771 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 FBXW5Q969U6 566 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 SPATA25Q9BR10 227 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 XYLT2Q9H1B5 865 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 NTMQ9P121 344 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 NDOR1Q9UHB4 597 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 TELO2Q9Y4R8 837 aa5.65□□□□□ -1.5
CD46-217ENST00000493796 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.64□□□□□ -1.51
CD46-217ENST00000493796 TCRBV5S4A2TA0A5A2 114 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 LTFP02788 710 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 SARSP49591 514 aaKnown RBP5.64□□□□□ -1.51
CD46-217ENST00000493796 EPHA5P54756 1037 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 GRIN1Q05586 938 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 ADAM9Q13443 819 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 KCTD1Q719H9 257 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 FEZF2Q8TBJ5 459 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 SH3RF2Q8TEC5 729 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 MRPL4Q9BYD3 311 aaKnown RBP5.64□□□□□ -1.51
CD46-217ENST00000493796 SFMBT1Q9UHJ3 866 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 WASF3Q9UPY6 502 aa5.64□□□□□ -1.51
CD46-217ENST00000493796 OTOL1A6NHN0 477 aaPredicted RBP5.63□□□□□ -1.51
CD46-217ENST00000493796 KCNQ2O43526 872 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 SRGAP2CP0DJJ0 459 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 PYGMP11217 842 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 FAHP16930 419 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 RPL13P26373 211 aaKnown RBP5.63□□□□□ -1.51
CD46-217ENST00000493796 GPR19Q15760 415 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 PAN2Q504Q3 1202 aaKnown RBP5.63□□□□□ -1.51
CD46-217ENST00000493796 PRR31Q5SQ13 230 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 C16orf59Q7L2K0 433 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.63□□□□□ -1.51
CD46-217ENST00000493796 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 ZC3H7AQ8IWR0 971 aaKnown RBP5.63□□□□□ -1.51
CD46-217ENST00000493796 TMEM209Q96SK2 561 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 CD244Q9BZW8 370 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 PIF1Q9H611 641 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 NCOA5Q9HCD5 579 aaKnown RBP5.63□□□□□ -1.51
CD46-217ENST00000493796 CBLCQ9ULV8 474 aa5.63□□□□□ -1.51
CD46-217ENST00000493796 A0A0G2JLL6 359 aaPredicted RBP5.62□□□□□ -1.51
CD46-217ENST00000493796 RASGRP1O95267 797 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 AMY2AP04746 511 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 PDE6AP16499 860 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 AMY2BP19961 511 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 ST5P78524 1137 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 SQSTM1Q13501 440 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 TMC5Q6UXY8 1006 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 ARHGAP36Q6ZRI8 547 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 SH3TC2Q8TF17 1288 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 SCLYQ96I15 445 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 MAGEB10Q96LZ2 347 aaPredicted RBP5.62□□□□□ -1.51
CD46-217ENST00000493796 KANSL2Q9H9L4 492 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 CATSPERZQ9NTU4 200 aa5.62□□□□□ -1.51
CD46-217ENST00000493796 RBPJLQ9UBG7 517 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms