RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 C4orf32Q8N8J7 132 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 TRPV1Q8NER1 839 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 KCNG4Q8TDN1 519 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 SH3TC2Q8TF17 1288 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 HAS1Q92839 578 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
LSM2-214ENST00000493387 FERMT2Q96AC1 680 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 AP5M1Q9H0R1 490 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 TMEM60Q9H2L4 133 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 SPC25Q9HBM1 224 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 TFIP11Q9UBB9 837 aaKnown RBP13.05□□□□□ -0.32
LSM2-214ENST00000493387 PCDHA12Q9UN75 941 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 CLIC4Q9Y696 253 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
LSM2-214ENST00000493387 KIAA1217Q5T5P2 1943 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 ATP9AO75110 1047 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 PPP6R2O75170 966 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 PSMD10O75832 226 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 GGPS1O95749 300 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 CAPN2P17655 700 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 CCND3P30281 292 aaPredicted RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 PTPAQ15257 358 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 FOXD4L6Q3SYB3 417 aaPredicted RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 ZNF746Q6NUN9 644 aaPredicted RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 FOXD4L3Q6VB84 417 aaPredicted RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 DTHD1Q6ZMT9 781 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 LINC00301Q8NCQ3 95 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 RDM1Q8NG50 284 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 JPH1Q9HDC5 661 aaPredicted RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 RCOR1Q9UKL0 485 aa13.04□□□□□ -0.32
LSM2-214ENST00000493387 GNEQ9Y223 722 aaKnown RBP13.04□□□□□ -0.32
LSM2-214ENST00000493387 LRRC37A2A6NM11 1700 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.03□□□□□ -0.32
LSM2-214ENST00000493387 SPTLC2O15270 562 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 DHX15O43143 795 aaKnown RBP13.03□□□□□ -0.32
LSM2-214ENST00000493387 FARP2O94887 1054 aaPredicted RBP13.03□□□□□ -0.32
LSM2-214ENST00000493387 ARIH2O95376 493 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 KCNA4P22459 653 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 SFNP31947 248 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 TXKP42681 527 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
LSM2-214ENST00000493387 JAK3P52333 1124 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 NKX3-2P78367 333 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 SP2Q02086 613 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 ITGB3BPQ13352 177 aaPredicted RBP13.03□□□□□ -0.32
LSM2-214ENST00000493387 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 PDIA5Q14554 519 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 CYFIP1Q7L576 1253 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 SMAP1Q8IYB5 467 aaPredicted RBP13.03□□□□□ -0.32
LSM2-214ENST00000493387 OR6J1Q8NGC5 347 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 ZNF333Q96JL9 665 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 SPATA32Q96LK8 384 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 MCOLN1Q9GZU1 580 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
LSM2-214ENST00000493387 TTC12Q9H892 705 aaPredicted RBP13.03□□□□□ -0.32
LSM2-214ENST00000493387 PKD2L1Q9P0L9 805 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 SLC9A2Q9UBY0 812 aa13.03□□□□□ -0.32
LSM2-214ENST00000493387 WDR64B1ANS9 1081 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 NOP56O00567 594 aaKnown RBP13.02□□□□□ -0.33
LSM2-214ENST00000493387 DYNC1LI2O43237 492 aaPredicted RBP13.02□□□□□ -0.33
LSM2-214ENST00000493387 ZEB2O60315 1214 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 KPNA6O60684 536 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 CCL5P13501 91 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 GJA9P57773 515 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 ARHGAP1Q07960 439 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 CLEC17AQ6ZS10 378 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 TLK2Q86UE8 772 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
LSM2-214ENST00000493387 PPTC7Q8NI37 304 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 ERMNQ8TAM6 284 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 SEPT1Q8WYJ6 367 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 AK8Q96MA6 479 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 SPATA33Q96N06 139 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 GBP4Q96PP9 640 aa13.02□□□□□ -0.33
LSM2-214ENST00000493387 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.33
LSM2-214ENST00000493387 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
LSM2-214ENST00000493387 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.33
LSM2-214ENST00000493387 DDX39AO00148 427 aaKnown RBP13.01□□□□□ -0.33
LSM2-214ENST00000493387 SLC26A4O43511 780 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 PPFIA4O75335 1185 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 LONP1P36776 959 aaKnown RBP13.01□□□□□ -0.33
LSM2-214ENST00000493387 TECP42680 631 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 CPT1AP50416 773 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 MIS18BP1Q6P0N0 1132 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 B3GNT9Q6UX72 402 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
LSM2-214ENST00000493387 ARRDC4Q8NCT1 418 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 LEO1Q8WVC0 666 aaPredicted RBP13.01□□□□□ -0.33
LSM2-214ENST00000493387 COPS5Q92905 334 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 RNF208Q9H0X6 261 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 UNC45AQ9H3U1 944 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 XPNPEP3Q9NQH7 507 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 PAK6Q9NQU5 681 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms