RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 UPF3BQ9BZI7 483 aaKnown RBP12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 LMAN2LQ9H0V9 348 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 NSUN3Q9H649 340 aaKnown RBP12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 VAT1LQ9HCJ6 419 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 ZSWIM5Q9P217 1185 aa12.77□□□□□ -0.37
SNRNP200-207ENST00000493271 MICAL3Q7RTP6 2002 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 NOP56O00567 594 aaKnown RBP12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 OPLAHO14841 1288 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 DCXO43602 365 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 RGS20O76081 388 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 RB1P06400 928 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 MYCLP12524 364 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 UBA1P22314 1058 aaKnown RBP12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 GPM6BQ13491 265 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 NEDD9Q14511 834 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 TMEM192Q8IY95 271 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 DIAPH3Q9NSV4 1193 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 ZNF215Q9UL58 517 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 PCDHA1Q9Y5I3 950 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 MYH6P13533 1939 aa12.76□□□□□ -0.37
SNRNP200-207ENST00000493271 GCOM1H8Y6P7 765 aaPredicted RBP12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 LGALS2P05162 132 aa12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 RPLP2P05387 115 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 POLR2MP0CAP2 368 aa12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 SMIM10L2AP0DMW4 78 aa12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 SMIM10L2BP0DMW5 78 aa12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 ICAM3P32942 547 aa12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 ZNF200P98182 395 aaPredicted RBP12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 METTL7BQ6UX53 244 aa12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-207ENST00000493271 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 C5orf67F2Z3F1 127 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 HIC1Q14526 733 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 FAM26DQ5JW98 314 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 CWC27Q6UX04 472 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 RPAINQ86UA6 219 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 ADHFE1Q8IWW8 467 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 C11orf84Q9BUA3 381 aaPredicted RBP12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 IFIH1Q9BYX4 1025 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 RNPEPQ9H4A4 650 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
SNRNP200-207ENST00000493271 FRMPD4Q14CM0 1322 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 NRCAMQ92823 1304 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 MYH7BA7E2Y1 1941 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 TREHO43280 583 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 FIBPO43427 364 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 SP2Q02086 613 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 ZP2Q05996 745 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 TAF2Q6P1X5 1199 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 XRRA1Q6P2D8 792 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 FIBCD1Q8N539 461 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 GIMAP8Q8ND71 665 aaPredicted RBP12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 IL17RAQ96F46 866 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 INPP4AQ96PE3 977 aaPredicted RBP12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 SENP7Q9BQF6 1050 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 MAD2L2Q9UI95 211 aa12.73□□□□□ -0.37
SNRNP200-207ENST00000493271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 SPATA31C2B4DYI2 1134 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 PPP1R11O60927 126 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 UPP2O95045 317 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 HOXA13P31271 388 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 TRDNQ13061 729 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 SEC23AQ15436 765 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 CTC1Q2NKJ3 1217 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 FAM43BQ6ZT52 329 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 RSPH3Q86UC2 560 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 SMC5Q8IY18 1101 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 IL31RAQ8NI17 732 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 PPP2R3CQ969Q6 453 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 UIMC1Q96RL1 719 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 GPR20Q99678 358 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 PLVAPQ9BX97 442 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
SNRNP200-207ENST00000493271 ADGRA3Q8IWK6 1321 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 PNMA6FA0A0J9YX94 578 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 ERICH2A1L162 156 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 CTSHP09668 335 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 CTNNB1P35222 781 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 ADAM17P78536 824 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 GRM4Q14833 912 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 SART3Q15020 963 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 SMAD2Q15796 467 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 EP400NLQ6ZTU2 488 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 ALYREFQ86V81 257 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 CHD1LQ86WJ1 897 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 FCHSD1Q86WN1 690 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 HOMER1Q86YM7 354 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms