RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 CHD1LQ86WJ1 897 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 FCHSD1Q86WN1 690 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 HOMER1Q86YM7 354 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 MRPL38Q96DV4 380 aaKnown RBP15.91■□□□□ 0.14
SAMM50-204ENST00000493161 PIGSQ96S52 555 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 UBAC1Q9BSL1 405 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 KRT23Q9C075 422 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 RNPEPQ9H4A4 650 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 OSBPL3Q9H4L5 887 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 TUT1Q9H6E5 874 aaKnown RBP15.91■□□□□ 0.14
SAMM50-204ENST00000493161 MLXIPQ9HAP2 919 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 SENP2Q9HC62 589 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 LGALS2P05162 132 aa15.9■□□□□ 0.14
SAMM50-204ENST00000493161 NT5C2P49902 561 aa15.9■□□□□ 0.14
SAMM50-204ENST00000493161 KCNV1Q6PIU1 500 aa15.9■□□□□ 0.14
SAMM50-204ENST00000493161 MAP3K20Q9NYL2 800 aaKnown RBP15.9■□□□□ 0.14
SAMM50-204ENST00000493161 GRXCR2A6NFK2 248 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 GCOM1H8Y6P7 765 aaPredicted RBP15.89■□□□□ 0.13
SAMM50-204ENST00000493161 CYTH3O43739 400 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 POLR2MP0CAP2 368 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 TGFB3P10600 412 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 CCND2P30279 289 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 SSTR3P32745 418 aaPredicted RBP15.89■□□□□ 0.13
SAMM50-204ENST00000493161 MRPS9P82933 396 aaKnown RBP15.89■□□□□ 0.13
SAMM50-204ENST00000493161 NUCB1Q02818 461 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 SEMA3FQ13275 785 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 TCEAL5Q5H9L2 206 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 TRIM50Q86XT4 487 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 NEK9Q8TD19 979 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 TOP1MTQ969P6 601 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 YME1L1Q96TA2 773 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 SETD4Q9NVD3 440 aa15.89■□□□□ 0.13
SAMM50-204ENST00000493161 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
SAMM50-204ENST00000493161 H3BNC9 293 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 GPM6BQ13491 265 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 TMEM192Q8IY95 271 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 BANK1Q8NDB2 785 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 SEPT8Q92599 483 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 RIOX1Q9H6W3 641 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 CNNM2Q9H8M5 875 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 RTEL1Q9NZ71 1219 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 CTNNA3Q9UI47 895 aa15.88■□□□□ 0.13
SAMM50-204ENST00000493161 DOCK5Q9H7D0 1870 aa15.87■□□□□ 0.13
SAMM50-204ENST00000493161 GRM4Q14833 912 aa15.87■□□□□ 0.13
SAMM50-204ENST00000493161 EP400NLQ6ZTU2 488 aa15.87■□□□□ 0.13
SAMM50-204ENST00000493161 CYFIP1Q7L576 1253 aa15.87■□□□□ 0.13
SAMM50-204ENST00000493161 PIBF1Q8WXW3 757 aa15.87■□□□□ 0.13
SAMM50-204ENST00000493161 GPR20Q99678 358 aa15.87■□□□□ 0.13
SAMM50-204ENST00000493161 RWDD1Q9H446 243 aaPredicted RBP15.87■□□□□ 0.13
SAMM50-204ENST00000493161 TAF6LQ9Y6J9 622 aa15.87■□□□□ 0.13
SAMM50-204ENST00000493161 PRR33A8MZF0 331 aa15.86■□□□□ 0.13
SAMM50-204ENST00000493161 SPATA31C2B4DYI2 1134 aa15.86■□□□□ 0.13
SAMM50-204ENST00000493161 NOP56O00567 594 aaKnown RBP15.86■□□□□ 0.13
SAMM50-204ENST00000493161 ADAM17P78536 824 aa15.86■□□□□ 0.13
SAMM50-204ENST00000493161 PTPROQ16827 1216 aa15.86■□□□□ 0.13
SAMM50-204ENST00000493161 UTP14CQ5TAP6 766 aaKnown RBP15.86■□□□□ 0.13
SAMM50-204ENST00000493161 SAMD3Q8N6K7 520 aa15.86■□□□□ 0.13
SAMM50-204ENST00000493161 INPP4AQ96PE3 977 aaPredicted RBP15.86■□□□□ 0.13
SAMM50-204ENST00000493161 IFIH1Q9BYX4 1025 aaKnown RBP15.86■□□□□ 0.13
SAMM50-204ENST00000493161 PNMA6FA0A0J9YX94 578 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 HIP1O00291 1037 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 CHRNA1P02708 482 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 LINC00271P0C7V0 271 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 ICAM3P32942 547 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 LTBRP36941 435 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 SP4Q02446 784 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 COL19A1Q14993 1142 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 TIGD5Q53EQ6 642 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 METTL7BQ6UX53 244 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 RUFY4Q6ZNE9 571 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 LMBR1Q8WVP7 490 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 PABPC5Q96DU9 382 aaKnown RBP15.85■□□□□ 0.13
SAMM50-204ENST00000493161 SAMD11Q96NU1 681 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 UIMC1Q96RL1 719 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 USP26Q9BXU7 913 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 FRMPD4Q14CM0 1322 aa15.85■□□□□ 0.13
SAMM50-204ENST00000493161 BAZ2BQ9UIF8 2168 aaKnown RBP15.85■□□□□ 0.13
SAMM50-204ENST00000493161 NLRC5Q86WI3 1866 aa15.84■□□□□ 0.13
SAMM50-204ENST00000493161 COL4A6Q14031 1691 aa15.84■□□□□ 0.13
SAMM50-204ENST00000493161 IFIT3O14879 490 aaKnown RBP15.84■□□□□ 0.13
SAMM50-204ENST00000493161 CAND2O75155 1236 aa15.84■□□□□ 0.13
SAMM50-204ENST00000493161 ARHGAP4P98171 946 aa15.84■□□□□ 0.13
SAMM50-204ENST00000493161 TROAPQ12815 778 aa15.84■□□□□ 0.13
SAMM50-204ENST00000493161 FAM26DQ5JW98 314 aa15.84■□□□□ 0.13
SAMM50-204ENST00000493161 ALYREFQ86V81 257 aaKnown RBP15.84■□□□□ 0.13
SAMM50-204ENST00000493161 NSUN3Q9H649 340 aaKnown RBP15.84■□□□□ 0.13
SAMM50-204ENST00000493161 CLDND1Q9NY35 253 aa15.84■□□□□ 0.13
SAMM50-204ENST00000493161 ATG2AQ2TAZ0 1938 aa15.84■□□□□ 0.13
SAMM50-204ENST00000493161 GRM6O15303 877 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 CYP21A2P08686 494 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 GHRP10912 638 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 PTH1RQ03431 593 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 ZP2Q05996 745 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 DLX2Q07687 328 aaPredicted RBP15.83■□□□□ 0.12
SAMM50-204ENST00000493161 NEDD9Q14511 834 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 PUS10Q3MIT2 529 aaKnown RBP15.83■□□□□ 0.12
SAMM50-204ENST00000493161 GNPTABQ3T906 1256 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 USP17L6PQ6QN14 398 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 IL17RAQ96F46 866 aa15.83■□□□□ 0.12
SAMM50-204ENST00000493161 POTEB3A0JP26 581 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms