RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 SMARCC1Q92922 1105 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 TRIM63Q969Q1 353 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 ZDHHC16Q969W1 377 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 FAM163AQ96GL9 167 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 TBATAQ96M53 351 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 AIFM3Q96NN9 605 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 MPHOSPH8Q99549 860 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 MAP3K14Q99558 947 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 NT5C1AQ9BXI3 368 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 RHOBTB2Q9BYZ6 727 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 NACAP1Q9BZK3 213 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 KRT23Q9C075 422 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 NAT10Q9H0A0 1025 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 OSBPL5Q9H0X9 879 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 NAPBQ9H115 298 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 RNF41Q9H4P4 317 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 KIAA1586Q9HCI6 787 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 NLRC4Q9NPP4 1024 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 LUC7LQ9NQ29 371 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 SEC31BQ9NQW1 1179 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 KCND1Q9NSA2 647 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 SAGE1Q9NXZ1 904 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 CLIP2Q9UDT6 1046 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 TUBE1Q9UJT0 475 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 FBXO10Q9UK96 956 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 CEP131Q9UPN4 1083 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 MAPRE3Q9UPY8 281 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 DMTF1Q9Y222 760 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 HPSEQ9Y251 543 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 GPSM3Q9Y4H4 160 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 PCDHGB3Q9Y5G1 929 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 MAGED1Q9Y5V3 778 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 TACC3Q9Y6A5 838 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 SLC4A7Q9Y6M7 1214 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 AKAP11Q9UKA4 1901 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 ANKRD36CQ5JPF3 1778 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 BCL9LQ86UU0 1499 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 TIAM2Q8IVF5 1701 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 DDX60Q8IY21 1712 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 ARAP2Q8WZ64 1704 aa4.24□□□□□ -1.73
ATPAF1-206ENST00000492233 SPATA31A5Q5VU36 1347 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 SPATA31A7Q8IWB4 1347 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 ITGB4P16144 1822 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 A0A1B0GVL5 298 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 BECN2A8MW95 431 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 C9IYK1 514 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 C3orf80F5H4A9 247 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 K7ENM7 598 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 IFIT3O14879 490 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 IKBKBO14920 756 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 PMM2O15305 246 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 MYO1BO43795 1136 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 CUTAO60888 179 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 CPNE3O75131 537 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 ABLIM3O94929 683 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 ZNF202O95125 648 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 EYA4O95677 639 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 POLR3DP05423 398 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 SLC3A2P08195 630 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 SLC10A3P09131 477 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 PCP11498 1178 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 FOSL1P15407 271 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 KCNA2P16389 499 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 PSMA3P25788 255 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 ATP6V1AP38606 617 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 IARSP41252 1262 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 EIF6P56537 245 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 GSDMDP57764 484 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 IRX3P78415 501 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 APBA1Q02410 837 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 CHRNDQ07001 517 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 LRMPQ12912 555 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 STRN3Q13033 797 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 ITPK1Q13572 414 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 CBX2Q14781 532 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 KRT72Q14CN4 511 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 NCAPHQ15003 741 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 SART3Q15020 963 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 PPP2R5BQ15173 497 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 SLC10A5Q5PT55 438 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 DNTTIP2Q5QJE6 756 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 RC3H1Q5TC82 1133 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 RNF219Q5W0B1 726 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 RESP18Q5W5W9 173 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 SHC4Q6S5L8 630 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 NFXL1Q6ZNB6 911 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 MFSD6Q6ZSS7 791 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 LHFPL2Q6ZUX7 228 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 C3orf67Q6ZVT6 689 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 SRLQ86TD4 932 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 PNMA8AQ86V59 439 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 TTC30AQ86WT1 665 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 MICU3Q86XE3 530 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 ANKRD13BQ86YJ7 626 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 RAB11FIP4Q86YS3 637 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 CCDC144CPQ8IYA2 1237 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 LCORLQ8N3X6 602 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 AOPEPQ8N6M6 819 aa4.23□□□□□ -1.73
ATPAF1-206ENST00000492233 GIMAP8Q8ND71 665 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms