RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 POTEMA6NI47 508 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 GAS7O60861 476 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 SNAI1O95863 264 aaPredicted RBP24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 CMA1P23946 247 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 GRK4P32298 578 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 RESP18Q5W5W9 173 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 PXYLP1Q8TE99 480 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 RIT2Q99578 217 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 RAB34Q9BZG1 259 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 VAV3Q9UKW4 847 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 SPIRE1Q08AE8 756 aa24.51■■□□□ 1.51
VCPKMT-204ENST00000491402 PDIA5Q14554 519 aa24.51■■□□□ 1.51
VCPKMT-204ENST00000491402 MRPS27Q92552 414 aaKnown RBP24.51■■□□□ 1.51
VCPKMT-204ENST00000491402 AK8Q96MA6 479 aa24.51■■□□□ 1.51
VCPKMT-204ENST00000491402 KATNBL1Q9H079 304 aa24.51■■□□□ 1.51
VCPKMT-204ENST00000491402 VTA1Q9NP79 307 aa24.51■■□□□ 1.51
VCPKMT-204ENST00000491402 DHX15O43143 795 aaKnown RBP24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 KCNA2P16389 499 aa24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 CYP2C19P33261 490 aa24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 USP49Q70CQ1 688 aa24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 FSIP1Q8NA03 581 aa24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 SH3TC2Q8TF17 1288 aa24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 SYMPKQ92797 1274 aaKnown RBP24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 EPSTI1Q96J88 318 aa24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 TBC1D22BQ9NU19 505 aa24.5■■□□□ 1.51
VCPKMT-204ENST00000491402 PP2D1A8MPX8 630 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 IGHA2P01877 340 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 TGFB3P10600 412 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 TRIM32Q13049 653 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 PPP2R5CQ13362 524 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 TRMT44Q8IYL2 757 aaKnown RBP24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 SLAIN1Q8ND83 568 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 GPT2Q8TD30 523 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 TEKT3Q9BXF9 490 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 MCOLN1Q9GZU1 580 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 ABHD16BQ9H3Z7 469 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 GOLPH3LQ9H4A5 285 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 LRWD1Q9UFC0 647 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 A0A1B0GVL5 298 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 CDC25AP30304 524 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 SP2Q02086 613 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 COL13A1Q5TAT6 717 aaPredicted RBP24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 SENP7Q9BQF6 1050 aa24.49■■□□□ 1.51
VCPKMT-204ENST00000491402 DDX39AO00148 427 aaKnown RBP24.48■■□□□ 1.51
VCPKMT-204ENST00000491402 SLC9C1Q4G0N8 1177 aa24.48■■□□□ 1.51
VCPKMT-204ENST00000491402 TAPT1Q6NXT6 567 aa24.48■■□□□ 1.51
VCPKMT-204ENST00000491402 KCNV1Q6PIU1 500 aa24.48■■□□□ 1.51
VCPKMT-204ENST00000491402 B3GNT9Q6UX72 402 aa24.48■■□□□ 1.51
VCPKMT-204ENST00000491402 SDF4Q9BRK5 362 aa24.48■■□□□ 1.51
VCPKMT-204ENST00000491402 PDGFCQ9NRA1 345 aa24.48■■□□□ 1.51
VCPKMT-204ENST00000491402 NFASCO94856 1347 aa24.48■■□□□ 1.51
VCPKMT-204ENST00000491402 ARIH2O95376 493 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 HMGCRP04035 888 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 PFKFB1P16118 471 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 UBA1P22314 1058 aaKnown RBP24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 SCFD2Q8WU76 684 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 FAM13BQ9NYF5 915 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 HPSEQ9Y251 543 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 MBD3O95983 291 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 LIG1P18858 919 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 NDUFA8P51970 172 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 ACVR2BQ13705 512 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 PRAMEF19Q5SWL8 479 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 MFSD14CQ5VZR4 134 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 NCAPH2Q6IBW4 605 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 CCDC73Q6ZRK6 1079 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 UNC45AQ9H3U1 944 aa24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 DDX41Q9UJV9 622 aaKnown RBP24.47■■□□□ 1.51
VCPKMT-204ENST00000491402 FAM237AA0A1B0GTK4 181 aa24.46■■□□□ 1.51
VCPKMT-204ENST00000491402 CHMP2AO43633 222 aa24.46■■□□□ 1.51
VCPKMT-204ENST00000491402 UBA7P41226 1012 aa24.46■■□□□ 1.51
VCPKMT-204ENST00000491402 TTLL4Q14679 1199 aa24.46■■□□□ 1.51
VCPKMT-204ENST00000491402 LY6KQ17RY6 165 aa24.46■■□□□ 1.51
VCPKMT-204ENST00000491402 CCDC62Q6P9F0 684 aa24.46■■□□□ 1.51
VCPKMT-204ENST00000491402 BCAS3Q9H6U6 928 aa24.46■■□□□ 1.51
VCPKMT-204ENST00000491402 ZHX1Q9UKY1 873 aaPredicted RBP24.46■■□□□ 1.51
VCPKMT-204ENST00000491402 RBM47A0AV96 593 aaKnown RBP24.45■■□□□ 1.5
VCPKMT-204ENST00000491402 INHAP05111 366 aa24.45■■□□□ 1.5
VCPKMT-204ENST00000491402 TXLNAP40222 546 aa24.45■■□□□ 1.5
VCPKMT-204ENST00000491402 CACNB2Q08289 660 aaPredicted RBP24.45■■□□□ 1.5
VCPKMT-204ENST00000491402 MMTAG2Q9BU76 263 aaKnown RBP24.45■■□□□ 1.5
VCPKMT-204ENST00000491402 CCSER1Q9C0I3 900 aa24.45■■□□□ 1.5
VCPKMT-204ENST00000491402 JPH1Q9HDC5 661 aaPredicted RBP24.45■■□□□ 1.5
VCPKMT-204ENST00000491402 KCNH3Q9ULD8 1083 aa24.45■■□□□ 1.5
VCPKMT-204ENST00000491402 EML1O00423 815 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 FAM160A1Q05DH4 1040 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 NEDD9Q14511 834 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 GIMAP8Q8ND71 665 aaPredicted RBP24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 TCEAL9Q9UHQ7 104 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 NR1I2O75469 434 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 MYCP01106 439 aaPredicted RBP24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 TXNP10599 105 aaKnown RBP24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 PRKAR2AP13861 404 aaKnown RBP24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 ADCYAP1R1P41586 468 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 KRT76Q01546 638 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 SNW1Q13573 536 aaKnown RBP24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 KRT79Q5XKE5 535 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 CYFIP1Q7L576 1253 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 CABP7Q86V35 215 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 ENGASEQ8NFI3 743 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms