RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	CFB	P00751	764 aa		22.45	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	GNAT1	P11488	350 aa		22.45	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	MYCL	P12524	364 aa	Predicted RBP	22.45	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	IER5L	Q5T953	404 aa		22.45	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	RNPEP	Q9H4A4	650 aa		22.45	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	MLXIP	Q9HAP2	919 aa		22.45	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	SORBS3	O60504	671 aa		22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	SMIM10L2A	P0DMW4	78 aa		22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	SMIM10L2B	P0DMW5	78 aa		22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	HOXC8	P31273	242 aa		22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	QRICH1	Q2TAL8	776 aa		22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	CCDC178	Q5BJE1	867 aa		22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	ESR2	Q92731	530 aa		22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	EVI5L	Q96CN4	794 aa		22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	RNF41	Q9H4P4	317 aa	Predicted RBP	22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	MAP3K20	Q9NYL2	800 aa	Known RBP	22.44	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	MYH7B	A7E2Y1	1941 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	DHX16	O60231	1041 aa	Known RBP	22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	CTSH	P09668	335 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	MX1	P20591	662 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	HAND2	P61296	217 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	ADAM15	Q13444	863 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	MCMDC2	Q4G0Z9	681 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	PNMA1	Q8ND90	353 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	OTUD7A	Q8TE49	926 aa	Predicted RBP	22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	PPP2R3C	Q969Q6	453 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	OSBPL7	Q9BZF2	842 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	VAT1L	Q9HCJ6	419 aa		22.43	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	COL4A6	Q14031	1691 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	RGS20	O76081	388 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	HSD17B4	P51659	736 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	ASPRV1	Q53RT3	343 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	C20orf194	Q5TEA3	1177 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	VSIG10L	Q86VR7	867 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	PDCD2L	Q9BRP1	358 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	ZKSCAN3	Q9BRR0	538 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	USP26	Q9BXU7	913 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	IRF2BPL	Q9H1B7	796 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	KAT14	Q9H8E8	782 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	RCAN3	Q9UKA8	241 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	ZDBF2	Q9HCK1	2354 aa		22.42	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	ZMYM6	O95789	1325 aa		22.41	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	SP2	Q02086	613 aa		22.41	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	STOX1	Q6ZVD7	989 aa		22.41	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	CLP1	Q92989	425 aa	Known RBP	22.41	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	PLVAP	Q9BX97	442 aa		22.41	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	USP34	Q70CQ2	3546 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	TBX10	O75333	385 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	EYA4	O95677	639 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	GTF2F1	P35269	517 aa	Known RBP eCLIP	22.4	■■□□□ 1.18	1e-7	■□□□□ 8.6
CDK5RAP2-218	ENST00000491334	NDUFV1	P49821	464 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	NT5C2	P49902	561 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	ZXDA	P98168	799 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	FOXK2	Q01167	660 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	FAM26D	Q5JW98	314 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	IQCA1	Q86XH1	822 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	FBXL6	Q8N531	539 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	SAMD3	Q8N6K7	520 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	AMN	Q9BXJ7	453 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	JMJD4	Q9H9V9	463 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	SETD4	Q9NVD3	440 aa		22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	PTPRZ1	P23471	2315 aa	Predicted RBP	22.4	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	CACNA1H	O95180	2353 aa		22.39	■■□□□ 1.18
CDK5RAP2-218	ENST00000491334	NOP56	O00567	594 aa	Known RBP	22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	LINC01565	O15544	149 aa		22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	MMP1	P03956	469 aa		22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	LGALS2	P05162	132 aa		22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	LINC00271	P0C7V0	271 aa		22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	UBA1	P22314	1058 aa	Known RBP	22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	TCF15	Q12870	199 aa		22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	TICAM2	Q86XR7	235 aa		22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	NLRC5	Q86WI3	1866 aa		22.39	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ADGRA3	Q8IWK6	1321 aa		22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	GFRA3	O60609	400 aa		22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	PARP1	P09874	1014 aa	Known RBP	22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	GHRHR	Q02643	423 aa		22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	BTG3	Q14201	252 aa	Predicted RBP	22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	PGM5	Q15124	567 aa		22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	MSLNL	Q96KJ4	702 aa		22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	FAM227B	Q96M60	508 aa		22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ALG13	Q9NP73	1137 aa	Known RBP	22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	PLAGL2	Q9UPG8	496 aa		22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	RALGAPA2	Q2PPJ7	1873 aa		22.38	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	CFAP54	Q96N23	3096 aa		22.37	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	CCDC171	Q6TFL3	1326 aa		22.37	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	LOC730098	B7Z3J9	87 aa		22.37	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	CCND2	P30279	289 aa		22.37	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ZBTB47	Q9UFB7	747 aa	Predicted RBP	22.37	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ENPP3	O14638	875 aa		22.36	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	OPLAH	O14841	1288 aa		22.36	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	CSPG5	O95196	566 aa		22.36	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	NAALADL2	Q58DX5	795 aa		22.36	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	TBC1D10C	Q8IV04	446 aa		22.36	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	P2RX5	Q93086	422 aa		22.36	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ZNF689	Q96CS4	500 aa	Predicted RBP	22.36	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334		A0A0D9SFI3	127 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	TRIM6-TRIM34	B2RNG4	842 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ZNF213	O14771	459 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	CHRNA1	P02708	482 aa		22.35	■■□□□ 1.17

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms