RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 MLXIPQ9HAP2 919 aa23.98■■□□□ 1.43
CLIP2-208ENST00000491075 HIP1O00291 1037 aa23.97■■□□□ 1.43
CLIP2-208ENST00000491075 SMIM10L2AP0DMW4 78 aa23.97■■□□□ 1.43
CLIP2-208ENST00000491075 SMIM10L2BP0DMW5 78 aa23.97■■□□□ 1.43
CLIP2-208ENST00000491075 ALADP13716 330 aa23.97■■□□□ 1.43
CLIP2-208ENST00000491075 HOXA13P31271 388 aaPredicted RBP23.97■■□□□ 1.43
CLIP2-208ENST00000491075 SP2Q02086 613 aa23.97■■□□□ 1.43
CLIP2-208ENST00000491075 TRAF1Q13077 416 aa23.97■■□□□ 1.43
CLIP2-208ENST00000491075 NEK9Q8TD19 979 aa23.97■■□□□ 1.43
CLIP2-208ENST00000491075 DOCK5Q9H7D0 1870 aa23.96■■□□□ 1.43
CLIP2-208ENST00000491075 H3BNC9 293 aa23.96■■□□□ 1.43
CLIP2-208ENST00000491075 LGALS2P05162 132 aa23.96■■□□□ 1.43
CLIP2-208ENST00000491075 BANK1Q8NDB2 785 aa23.96■■□□□ 1.43
CLIP2-208ENST00000491075 TOP1MTQ969P6 601 aa23.96■■□□□ 1.43
CLIP2-208ENST00000491075 OSBPL3Q9H4L5 887 aa23.96■■□□□ 1.43
CLIP2-208ENST00000491075 PIEZO1Q92508 2521 aa23.96■■□□□ 1.43
CLIP2-208ENST00000491075 ATG2AQ2TAZ0 1938 aa23.95■■□□□ 1.42
CLIP2-208ENST00000491075 GCOM1H8Y6P7 765 aaPredicted RBP23.95■■□□□ 1.42
CLIP2-208ENST00000491075 RBAK-RBAKDNI3L0D1 243 aa23.95■■□□□ 1.42
CLIP2-208ENST00000491075 NOP56O00567 594 aaKnown RBP23.95■■□□□ 1.42
CLIP2-208ENST00000491075 POLR2MP0CAP2 368 aa23.95■■□□□ 1.42
CLIP2-208ENST00000491075 MAD2L2Q9UI95 211 aa23.95■■□□□ 1.42
CLIP2-208ENST00000491075 FAM50BQ9Y247 325 aa23.95■■□□□ 1.42
CLIP2-208ENST00000491075 TREHO43280 583 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 GNAT1P11488 350 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 GPM6BQ13491 265 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 SEC23AQ15436 765 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 GNPTABQ3T906 1256 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 SMC5Q8IY18 1101 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 TMEM192Q8IY95 271 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 APBB2Q92870 758 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 GPKOWQ92917 476 aaPredicted RBP eCLIP23.94■■□□□ 1.42
CLIP2-208ENST00000491075 PABPC5Q96DU9 382 aaKnown RBP23.94■■□□□ 1.42
CLIP2-208ENST00000491075 USP26Q9BXU7 913 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 RNPEPQ9H4A4 650 aa23.94■■□□□ 1.42
CLIP2-208ENST00000491075 KAT6AQ92794 2004 aa23.93■■□□□ 1.42
CLIP2-208ENST00000491075 PALM3A6NDB9 673 aaPredicted RBP23.93■■□□□ 1.42
CLIP2-208ENST00000491075 H3BQ06 376 aaPredicted RBP23.93■■□□□ 1.42
CLIP2-208ENST00000491075 UPP2O95045 317 aa23.93■■□□□ 1.42
CLIP2-208ENST00000491075 CTSHP09668 335 aa23.93■■□□□ 1.42
CLIP2-208ENST00000491075 COL19A1Q14993 1142 aa23.93■■□□□ 1.42
CLIP2-208ENST00000491075 HOMER1Q86YM7 354 aa23.93■■□□□ 1.42
CLIP2-208ENST00000491075 PLEKHM2Q8IWE5 1019 aa23.93■■□□□ 1.42
CLIP2-208ENST00000491075 IFIH1Q9BYX4 1025 aaKnown RBP23.93■■□□□ 1.42
CLIP2-208ENST00000491075 NSUN3Q9H649 340 aaKnown RBP23.93■■□□□ 1.42
CLIP2-208ENST00000491075 BAZ2BQ9UIF8 2168 aaKnown RBP23.92■■□□□ 1.42
CLIP2-208ENST00000491075 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.92■■□□□ 1.42
CLIP2-208ENST00000491075 STAM2O75886 525 aa23.92■■□□□ 1.42
CLIP2-208ENST00000491075 CSPP1Q1MSJ5 1256 aa23.92■■□□□ 1.42
CLIP2-208ENST00000491075 TCEAL5Q5H9L2 206 aa23.92■■□□□ 1.42
CLIP2-208ENST00000491075 FCHSD1Q86WN1 690 aa23.92■■□□□ 1.42
CLIP2-208ENST00000491075 PRKAG3Q9UGI9 489 aa23.92■■□□□ 1.42
CLIP2-208ENST00000491075 FRMPD4Q14CM0 1322 aa23.91■■□□□ 1.42
CLIP2-208ENST00000491075 AAMPQ13685 434 aa23.91■■□□□ 1.42
CLIP2-208ENST00000491075 NEDD9Q14511 834 aa23.91■■□□□ 1.42
CLIP2-208ENST00000491075 B4GALNT3Q6L9W6 998 aa23.91■■□□□ 1.42
CLIP2-208ENST00000491075 METTL7BQ6UX53 244 aa23.91■■□□□ 1.42
CLIP2-208ENST00000491075 CHD1LQ86WJ1 897 aa23.91■■□□□ 1.42
CLIP2-208ENST00000491075 ZFP91Q96JP5 570 aaPredicted RBP23.91■■□□□ 1.42
CLIP2-208ENST00000491075 INPP4AQ96PE3 977 aaPredicted RBP23.91■■□□□ 1.42
CLIP2-208ENST00000491075 RIOX1Q9H6W3 641 aa23.91■■□□□ 1.42
CLIP2-208ENST00000491075 ZNF215Q9UL58 517 aaPredicted RBP23.91■■□□□ 1.42
CLIP2-208ENST00000491075 DCXO43602 365 aa23.9■■□□□ 1.42
CLIP2-208ENST00000491075 ICAM3P32942 547 aa23.9■■□□□ 1.42
CLIP2-208ENST00000491075 PIGSQ96S52 555 aa23.9■■□□□ 1.42
CLIP2-208ENST00000491075 OSBPL7Q9BZF2 842 aa23.9■■□□□ 1.42
CLIP2-208ENST00000491075 C5orf42Q9H799 3197 aa23.9■■□□□ 1.42
CLIP2-208ENST00000491075 NCK2O43639 380 aa23.89■■□□□ 1.41
CLIP2-208ENST00000491075 MRPS9P82933 396 aaKnown RBP23.89■■□□□ 1.41
CLIP2-208ENST00000491075 ZP2Q05996 745 aa23.89■■□□□ 1.41
CLIP2-208ENST00000491075 GRM4Q14833 912 aa23.89■■□□□ 1.41
CLIP2-208ENST00000491075 EP400NLQ6ZTU2 488 aa23.89■■□□□ 1.41
CLIP2-208ENST00000491075 UIMC1Q96RL1 719 aa23.89■■□□□ 1.41
CLIP2-208ENST00000491075 GPR20Q99678 358 aa23.89■■□□□ 1.41
CLIP2-208ENST00000491075 RWDD1Q9H446 243 aaPredicted RBP23.89■■□□□ 1.41
CLIP2-208ENST00000491075 BCAS3Q9H6U6 928 aa23.89■■□□□ 1.41
CLIP2-208ENST00000491075 SETD4Q9NVD3 440 aa23.89■■□□□ 1.41
CLIP2-208ENST00000491075 PNMA6FA0A0J9YX94 578 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 SPATA31C2B4DYI2 1134 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 FIBPO43427 364 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 SLC35G1Q2M3R5 365 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 FAM26DQ5JW98 314 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 CYB5R4Q7L1T6 521 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 CYFIP1Q7L576 1253 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 IL17RAQ96F46 866 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 CLDND1Q9NY35 253 aa23.88■■□□□ 1.41
CLIP2-208ENST00000491075 POTEB3A0JP26 581 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 C5orf67F2Z3F1 127 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 CTNNB1P35222 781 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 ADAM17P78536 824 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 NUCB1Q02818 461 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 TRDNQ13061 729 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 POTEBQ6S5H4 581 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 TRIM50Q86XT4 487 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 FIBCD1Q8N539 461 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 LMBR1Q8WVP7 490 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 C11orf84Q9BUA3 381 aaPredicted RBP23.87■■□□□ 1.41
CLIP2-208ENST00000491075 LMAN2LQ9H0V9 348 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 RWDD3Q9Y3V2 267 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 WDFY4Q6ZS81 3184 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms