RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 CCDC69A6NI79 296 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 MPHOSPH10O00566 681 aaKnown RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 ZBTB43O43298 467 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 EEF2P13639 858 aaKnown RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 FDPSP14324 419 aaKnown RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 CAP2P40123 477 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 RCAN1P53805 252 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 FMR1Q06787 632 aaKnown RBP eCLIP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 PKP1Q13835 747 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 SART3Q15020 963 aaKnown RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 ABCB5Q2M3G0 1257 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 EAPPQ56P03 285 aaPredicted RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 FAM26DQ5JW98 314 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 KIAA1755Q5JYT7 1200 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 NFXL1Q6ZNB6 911 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 TMEM179Q6ZVK1 233 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 KRT26Q7Z3Y9 468 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 CCDC84Q86UT8 332 aaPredicted RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 USP48Q86UV5 1035 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 TREML1Q86YW5 311 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 ETFBKMTQ8IXQ9 262 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 CMTR1Q8N1G2 835 aaKnown RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 LRRC47Q8N1G4 583 aaKnown RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 TMTC2Q8N394 836 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 FANCBQ8NB91 859 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 ACER1Q8TDN7 264 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 CLP1Q92989 425 aaKnown RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 MKL1Q969V6 931 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 GLIS2Q9BZE0 524 aaPredicted RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 PRDM6Q9NQX0 595 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 DNAJB12Q9NXW2 375 aaKnown RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 CLIP2Q9UDT6 1046 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 ZBTB21Q9ULJ3 1066 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 NAP1L2Q9ULW6 460 aaPredicted RBP5.66□□□□□ -1.5
EPCAM-206ENST00000490733 SLC6A14Q9UN76 642 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 STX8Q9UNK0 236 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 ZDHHC9Q9Y397 364 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 SLC12A7Q9Y666 1083 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 MYH15Q9Y2K3 1946 aa5.66□□□□□ -1.5
EPCAM-206ENST00000490733 ARID1BQ8NFD5 2236 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 PTPDC1A2A3K4 754 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 GOLGA8AA7E2F4 631 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 TRAF5O00463 557 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 CYTH3O43739 400 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 USP2O75604 605 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 SASH3O75995 380 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 DDAH1O94760 285 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 PLEKHA8P1O95397 391 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 TTLL1O95922 423 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 SNHG28P0DPA3 235 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 PDHBP11177 359 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 TOP1P11387 765 aaKnown RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 NID1P14543 1247 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 VEGFAP15692 232 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 TARSP26639 723 aaKnown RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 GJB2P29033 226 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 ECE1P42892 770 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 CHRNA4P43681 627 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 METAP2P50579 478 aaKnown RBP eCLIP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 NAA30Q147X3 362 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 GRM4Q14833 912 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 RAB3GAP1Q15042 981 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 CCDC178Q5BJE1 867 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 MAP1SQ66K74 1059 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 C16orf46Q6P387 395 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 MOB2Q70IA6 237 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 CATIPQ7Z7H3 387 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 PNMA8AQ86V59 439 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 CD163Q86VB7 1156 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 SRBD1Q8N5C6 995 aaKnown RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 ZNF526Q8TF50 670 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 NUP133Q8WUM0 1156 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 PHKBQ93100 1093 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 ZKSCAN4Q969J2 545 aaPredicted RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 COL26A1Q96A83 441 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 DCPSQ96C86 337 aaKnown RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 CHMP4CQ96CF2 233 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 SHISA4Q96DD7 197 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 CDCA5Q96FF9 252 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 LLPHQ9BRT6 129 aaKnown RBP5.65□□□□□ -1.5
EPCAM-206ENST00000490733 ZNF341Q9BYN7 854 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 KAT14Q9H8E8 782 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 KANSL2Q9H9L4 492 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 ZFP64Q9NPA5 681 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 NYAP2Q9P242 653 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 MAD2L2Q9UI95 211 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 NAGPAQ9UK23 515 aa5.65□□□□□ -1.5
EPCAM-206ENST00000490733 PCNTO95613 3336 aa5.65□□□□□ -1.51
EPCAM-206ENST00000490733 C1QTNF9BB2RNN3 333 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 ZBTB42B2RXF5 422 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 TNFRSF10BO14763 440 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 CTNND1O60716 968 aaKnown RBP5.64□□□□□ -1.51
EPCAM-206ENST00000490733 HSP90AA1P07900 732 aaKnown RBP5.64□□□□□ -1.51
EPCAM-206ENST00000490733 GOLGA8HP0CJ92 632 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 IFNAR1P17181 557 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 ICA1Q05084 483 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 PRKG1Q13976 671 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 PKN1Q16512 942 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms