RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.61■■□□□ 1.21
SMC4-222ENST00000490207 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.61■■□□□ 1.21
SMC4-222ENST00000490207 FOSP01100 380 aaPredicted RBP22.61■■□□□ 1.21
SMC4-222ENST00000490207 FGBP02675 491 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 PFKMP08237 780 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 ITGB5P18084 799 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 EVCP57679 992 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 SP4Q02446 784 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 AP3B2Q13367 1082 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 MTMR1Q13613 665 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 GIMAP8Q8ND71 665 aaPredicted RBP22.61■■□□□ 1.21
SMC4-222ENST00000490207 PHKBQ93100 1093 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 GPR20Q99678 358 aa22.61■■□□□ 1.21
SMC4-222ENST00000490207 UPF3BQ9BZI7 483 aaKnown RBP22.61■■□□□ 1.21
SMC4-222ENST00000490207 PRPF3O43395 683 aaKnown RBP22.6■■□□□ 1.21
SMC4-222ENST00000490207 KCNA2P16389 499 aa22.6■■□□□ 1.21
SMC4-222ENST00000490207 PDIA3P30101 505 aaKnown RBP22.6■■□□□ 1.21
SMC4-222ENST00000490207 RFC2P35250 354 aa22.6■■□□□ 1.21
SMC4-222ENST00000490207 AKAP17AQ02040 695 aaKnown RBP22.6■■□□□ 1.21
SMC4-222ENST00000490207 OTOP2Q7RTS6 562 aa22.6■■□□□ 1.21
SMC4-222ENST00000490207 CCDC12Q8WUD4 166 aaPredicted RBP22.6■■□□□ 1.21
SMC4-222ENST00000490207 DHX38Q92620 1227 aaKnown RBP22.6■■□□□ 1.21
SMC4-222ENST00000490207 FAM161BQ96MY7 647 aa22.6■■□□□ 1.21
SMC4-222ENST00000490207 JADE2Q9NQC1 790 aa22.6■■□□□ 1.21
SMC4-222ENST00000490207 PKD2L1Q9P0L9 805 aa22.6■■□□□ 1.21
SMC4-222ENST00000490207 H3BRB1 525 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 ATP9AO75110 1047 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 IQCF3P0C7M6 154 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 CLK2P49760 499 aaKnown RBP22.59■■□□□ 1.21
SMC4-222ENST00000490207 CCT2P78371 535 aaKnown RBP22.59■■□□□ 1.21
SMC4-222ENST00000490207 NTRK3Q16288 839 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 PKN1Q16512 942 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 DEFB128Q7Z7B8 93 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 AFAP1L1Q8TED9 768 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 VWCEQ96DN2 955 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 SLC26A6Q9BXS9 759 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 RNF26Q9BY78 433 aaPredicted RBP22.59■■□□□ 1.21
SMC4-222ENST00000490207 TUT1Q9H6E5 874 aaKnown RBP22.59■■□□□ 1.21
SMC4-222ENST00000490207 NCOA5Q9HCD5 579 aaKnown RBP22.59■■□□□ 1.21
SMC4-222ENST00000490207 TMEM260Q9NX78 707 aa22.59■■□□□ 1.21
SMC4-222ENST00000490207 ESYT2A0FGR8 921 aa22.58■■□□□ 1.21
SMC4-222ENST00000490207 IFNAR1P17181 557 aa22.58■■□□□ 1.21
SMC4-222ENST00000490207 UTP14CQ5TAP6 766 aaKnown RBP22.58■■□□□ 1.21
SMC4-222ENST00000490207 TRIM50Q86XT4 487 aa22.58■■□□□ 1.21
SMC4-222ENST00000490207 MXRA8Q9BRK3 442 aa22.58■■□□□ 1.21
SMC4-222ENST00000490207 CXXC1Q9P0U4 656 aaPredicted RBP22.58■■□□□ 1.21
SMC4-222ENST00000490207 ZNF215Q9UL58 517 aaPredicted RBP22.58■■□□□ 1.21
SMC4-222ENST00000490207 TELO2Q9Y4R8 837 aa22.58■■□□□ 1.21
SMC4-222ENST00000490207 TMEM265A0A087WTH1 108 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 MAFGO15525 162 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 PPFIA3O75145 1194 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 DNAJB2P25686 324 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 SREBF1P36956 1147 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 RBL2Q08999 1139 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 PTK7Q13308 1070 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 JAKMIP3Q5VZ66 844 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 GUCD1Q96NT3 240 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 ZMYND12Q9H0C1 365 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 C6orf50Q9HD87 102 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 PDRG1Q9NUG6 133 aa22.57■■□□□ 1.2
SMC4-222ENST00000490207 C17orf102A2RUQ5 167 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 ZBBXA8MT70 800 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 GRXCR1A8MXD5 290 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 SMIM10L2AP0DMW4 78 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 SMIM10L2BP0DMW5 78 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 SELPP16109 830 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 ZNF200P98182 395 aaPredicted RBP22.56■■□□□ 1.2
SMC4-222ENST00000490207 HIC1Q14526 733 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 LRRC8DQ7L1W4 858 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 CCDC148Q8NFR7 591 aa22.56■■□□□ 1.2
SMC4-222ENST00000490207 TTYH1Q9H313 450 aaPredicted RBP22.56■■□□□ 1.2
SMC4-222ENST00000490207 TET1Q8NFU7 2136 aa22.55■■□□□ 1.2
SMC4-222ENST00000490207 CKBP12277 381 aa22.55■■□□□ 1.2
SMC4-222ENST00000490207 ACTN1P12814 892 aa22.55■■□□□ 1.2
SMC4-222ENST00000490207 TCF7P36402 384 aaPredicted RBP22.55■■□□□ 1.2
SMC4-222ENST00000490207 REXO1Q8N1G1 1221 aaKnown RBP22.55■■□□□ 1.2
SMC4-222ENST00000490207 ZNF274Q96GC6 653 aaPredicted RBP22.55■■□□□ 1.2
SMC4-222ENST00000490207 LARP6Q9BRS8 491 aaKnown RBP22.55■■□□□ 1.2
SMC4-222ENST00000490207 FTOQ9C0B1 505 aaKnown RBP eCLIP22.55■■□□□ 1.2
SMC4-222ENST00000490207 SEMA6BQ9H3T3 888 aa22.55■■□□□ 1.2
SMC4-222ENST00000490207 KCNH7Q9NS40 1196 aa22.55■■□□□ 1.2
SMC4-222ENST00000490207 STXBP5LQ9Y2K9 1186 aa22.55■■□□□ 1.2
SMC4-222ENST00000490207 KAT6AQ92794 2004 aa22.55■■□□□ 1.2
SMC4-222ENST00000490207 GNA11P29992 359 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 HOXC8P31273 242 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 ANAPC15P60006 121 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 ARHGAP4P98171 946 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 TRIM71Q2Q1W2 868 aaKnown RBP22.54■■□□□ 1.2
SMC4-222ENST00000490207 CEP55Q53EZ4 464 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 MCTP2Q6DN12 878 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 TRIM22Q8IYM9 498 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 CYP2W1Q8TAV3 490 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 WNT8BQ93098 351 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 TIFAQ96CG3 184 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 PBX4Q9BYU1 374 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 JPH1Q9HDC5 661 aaPredicted RBP22.54■■□□□ 1.2
SMC4-222ENST00000490207 SLC4A7Q9Y6M7 1214 aa22.54■■□□□ 1.2
SMC4-222ENST00000490207 PTPRSQ13332 1948 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 CPLX1O14810 134 aa22.53■■□□□ 1.2
SMC4-222ENST00000490207 PARNO95453 639 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms