RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 SERINC5Q86VE9 423 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 AFAP1L1Q8TED9 768 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
SRSF4-204ENST00000489898 CCDC69A6NI79 296 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 FIBPO43427 364 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 STAM2O75886 525 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 FGBP02675 491 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 PFKMP08237 780 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 CALM1P0DP23 149 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 CALM2P0DP24 149 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 CALM3P0DP25 149 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 CASTP20810 708 aaKnown RBP13.62□□□□□ -0.23
SRSF4-204ENST00000489898 RFC2P35250 354 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 EVCP57679 992 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 DEFB103AP81534 67 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 PKN1Q16512 942 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 DEFB128Q7Z7B8 93 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 DHX37Q8IY37 1157 aaKnown RBP13.62□□□□□ -0.23
SRSF4-204ENST00000489898 MAFAQ8NHW3 353 aaPredicted RBP13.62□□□□□ -0.23
SRSF4-204ENST00000489898 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 SPATA33Q96N06 139 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 PCYT2Q99447 389 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 NKX2-4Q9H2Z4 354 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 SLC12A7Q9Y666 1083 aa13.62□□□□□ -0.23
SRSF4-204ENST00000489898 KLF18A0A0U1RQI7 1052 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 LCHNA4D1U4 455 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 PPFIA4O75335 1185 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 GNAQP50148 359 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 WDR5P61964 334 aaKnown RBP13.61□□□□□ -0.23
SRSF4-204ENST00000489898 BRDTQ58F21 947 aaPredicted RBP13.61□□□□□ -0.23
SRSF4-204ENST00000489898 ZNF618Q5T7W0 954 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 PPP1R18Q6NYC8 613 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 KCNV1Q6PIU1 500 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 LRRC8DQ7L1W4 858 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 CYFIP1Q7L576 1253 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 TMCO2Q7Z6W1 182 aaPredicted RBP13.61□□□□□ -0.23
SRSF4-204ENST00000489898 TMTC2Q8N394 836 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 CCDC82Q8N4S0 544 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 CYP2W1Q8TAV3 490 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 PGBD1Q96JS3 809 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 SENP7Q9BQF6 1050 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 ALG1Q9BT22 464 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 RTEL1Q9NZ71 1219 aa13.61□□□□□ -0.23
SRSF4-204ENST00000489898 TCF20Q9UGU0 1960 aaKnown RBP13.61□□□□□ -0.23
SRSF4-204ENST00000489898 IGLV3-22A0A075B6J6 115 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
SRSF4-204ENST00000489898 SMIM10L2AP0DMW4 78 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 SMIM10L2BP0DMW5 78 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 SELPP16109 830 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 APOBRQ0VD83 1088 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 TRAF1Q13077 416 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 PTK7Q13308 1070 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 ITGB3BPQ13352 177 aaPredicted RBP13.6□□□□□ -0.23
SRSF4-204ENST00000489898 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
SRSF4-204ENST00000489898 RTN1Q16799 776 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 XRRA1Q6P2D8 792 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 NFXL1Q6ZNB6 911 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.6□□□□□ -0.23
SRSF4-204ENST00000489898 LMBR1Q8WVP7 490 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 GPRASP2Q96D09 838 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 KATNAL1Q9BW62 490 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 PRDM12Q9H4Q4 367 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 PRDM6Q9NQX0 595 aa13.6□□□□□ -0.23
SRSF4-204ENST00000489898 GOLGA8AA7E2F4 631 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 GOLGA8BA8MQT2 603 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 H3BRB1 525 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 TREHO43280 583 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 ZBTB43O43298 467 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 LPXNO60711 386 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 FOSL2P15408 326 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 RPS6KB1P23443 525 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 ADD1P35611 737 aaKnown RBP13.59□□□□□ -0.23
SRSF4-204ENST00000489898 NPY5RQ15761 445 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 MARCH8Q5T0T0 291 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 HEATR3Q7Z4Q2 680 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 SLC17A8Q8NDX2 589 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 COL25A1Q9BXS0 654 aaPredicted RBP13.59□□□□□ -0.23
SRSF4-204ENST00000489898 RNPEPQ9H4A4 650 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 TUT1Q9H6E5 874 aaKnown RBP13.59□□□□□ -0.23
SRSF4-204ENST00000489898 PSTPIP2Q9H939 334 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 RIC8AQ9NPQ8 531 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
SRSF4-204ENST00000489898 TMEM260Q9NX78 707 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 SEC63Q9UGP8 760 aaKnown RBP13.59□□□□□ -0.23
SRSF4-204ENST00000489898 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 EMSYQ7Z589 1322 aa13.59□□□□□ -0.23
SRSF4-204ENST00000489898 BAIAP3O94812 1187 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 CA3P07451 260 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 LINC00271P0C7V0 271 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 ATP2A2P16615 1042 aaKnown RBP13.58□□□□□ -0.24
SRSF4-204ENST00000489898 SREBF1P36956 1147 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 MGAT3Q09327 533 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 BFSP2Q13515 415 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 RAB30Q15771 203 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 PFKFB3Q16875 520 aaPredicted RBP13.58□□□□□ -0.24
SRSF4-204ENST00000489898 GNPTABQ3T906 1256 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms