RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 CXXC1Q9P0U4 656 aaPredicted RBP13.46□□□□□ -0.25
GGPS1-207ENST00000489692 MCM3APO60318 1980 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
GGPS1-207ENST00000489692 UBA1P22314 1058 aaKnown RBP13.45□□□□□ -0.26
GGPS1-207ENST00000489692 GJB2P29033 226 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 PBX2P40425 430 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 SP4Q02446 784 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 RAB30Q15771 203 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 KIAA0753Q2KHM9 967 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 CELF3Q5SZQ8 465 aaKnown RBP13.45□□□□□ -0.26
GGPS1-207ENST00000489692 GDF6Q6KF10 455 aaPredicted RBP13.45□□□□□ -0.26
GGPS1-207ENST00000489692 FBXL16Q8N461 479 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 FANCBQ8NB91 859 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 MAFAQ8NHW3 353 aaPredicted RBP13.45□□□□□ -0.26
GGPS1-207ENST00000489692 PBX4Q9BYU1 374 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 PSTPIP2Q9H939 334 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
GGPS1-207ENST00000489692 LTBP2Q14767 1821 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 TMEM265A0A087WTH1 108 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 SPDYE3A6NKU9 549 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 RGS20O76081 388 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 PFKMP08237 780 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 TGFB3P10600 412 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 SMARCA1P28370 1054 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 COL9A3Q14050 684 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-207ENST00000489692 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
GGPS1-207ENST00000489692 NLRX1Q86UT6 975 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 KAT2BQ92831 832 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.26
GGPS1-207ENST00000489692 SYAP1Q96A49 352 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-207ENST00000489692 EMID1Q96A84 441 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-207ENST00000489692 LLPHQ9BRT6 129 aaKnown RBP13.44□□□□□ -0.26
GGPS1-207ENST00000489692 SLC28A3Q9HAS3 691 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 MTMR6Q9Y217 621 aa13.44□□□□□ -0.26
GGPS1-207ENST00000489692 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
GGPS1-207ENST00000489692 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 GOLGA8AA7E2F4 631 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 ZBTB43O43298 467 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 FIBPO43427 364 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 PPFIA4O75335 1185 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 STAM2O75886 525 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 ATP2A2P16615 1042 aaKnown RBP13.43□□□□□ -0.26
GGPS1-207ENST00000489692 RFC2P35250 354 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 RABGGTBP53611 331 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 SP2Q02086 613 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 NEDD9Q14511 834 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 GRIN2CQ14957 1233 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 UBE2SQ16763 222 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 RTN1Q16799 776 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 HSDL1Q3SXM5 330 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 UTP14CQ5TAP6 766 aaKnown RBP13.43□□□□□ -0.26
GGPS1-207ENST00000489692 MYSM1Q5VVJ2 828 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 TMTC3Q6ZXV5 915 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 CYFIP1Q7L576 1253 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 CAGE1Q8TC20 777 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 GAS2L1Q99501 681 aaPredicted RBP13.43□□□□□ -0.26
GGPS1-207ENST00000489692 NKX2-4Q9H2Z4 354 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 EHMT1Q9H9B1 1298 aa13.43□□□□□ -0.26
GGPS1-207ENST00000489692 RBM28Q9NW13 759 aaKnown RBP13.43□□□□□ -0.26
GGPS1-207ENST00000489692 KLF18A0A0U1RQI7 1052 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 DLL1O00548 723 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 F2P00734 622 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 IQCF3P0C7M6 154 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 SELPP16109 830 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 NCLP19338 710 aaKnown RBP13.42□□□□□ -0.26
GGPS1-207ENST00000489692 KCNJ6P48051 423 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 NAPAP54920 295 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 MRPS9P82933 396 aaKnown RBP13.42□□□□□ -0.26
GGPS1-207ENST00000489692 EXOSC10Q01780 885 aaKnown RBP13.42□□□□□ -0.26
GGPS1-207ENST00000489692 ZSCAN23Q3MJ62 389 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 RASIP1Q5U651 963 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 CAVIN1Q6NZI2 390 aaKnown RBP13.42□□□□□ -0.26
GGPS1-207ENST00000489692 APOA5Q6Q788 366 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 SGMS1Q86VZ5 419 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 AFAP1L1Q8TED9 768 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 PPM1EQ8WY54 764 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 PKD2L1Q9P0L9 805 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 GTF2IRD1Q9UHL9 959 aa13.42□□□□□ -0.26
GGPS1-207ENST00000489692 C17orf102A2RUQ5 167 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 PIK3CDO00329 1044 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 MEIS2O14770 477 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 PFKFB2O60825 505 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 IGFBP4P22692 258 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
GGPS1-207ENST00000489692 PCNX4Q63HM2 1172 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 PPP2R2DQ66LE6 453 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 XRRA1Q6P2D8 792 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 Q6ZUG5 572 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 LRRC8DQ7L1W4 858 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 SESTD1Q86VW0 696 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
GGPS1-207ENST00000489692 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms