RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 MICAL3Q7RTP6 2002 aa10.84□□□□□ -0.67
SNX17-207ENST00000489402 DOCK5Q9H7D0 1870 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 PNMA6FA0A0J9YX94 578 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 RSPH10B2B2RC85 870 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 H3BRB1 525 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 STAM2O75886 525 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 RSPH10BP0C881 870 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 ERVK-21P61565 698 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 MBTPS1Q14703 1052 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 WTAPQ15007 396 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 SERINC5Q86VE9 423 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 MYOCDQ8IZQ8 938 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 DBF4BQ8NFT6 615 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 NCOA7Q8NI08 942 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 ATP6V0A1Q93050 837 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 C16orf70Q9BSU1 422 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 USP26Q9BXU7 913 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 TUT1Q9H6E5 874 aaKnown RBP10.83□□□□□ -0.68
SNX17-207ENST00000489402 SUGCTQ9HAC7 445 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 INSL6Q9Y581 213 aa10.83□□□□□ -0.68
SNX17-207ENST00000489402 C5orf42Q9H799 3197 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 BAZ2BQ9UIF8 2168 aaKnown RBP10.82□□□□□ -0.68
SNX17-207ENST00000489402 CYTH3O43739 400 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 CAND2O75155 1236 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 LGALS2P05162 132 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 SMIM10L2AP0DMW4 78 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 SMIM10L2BP0DMW5 78 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 GNAT1P11488 350 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
SNX17-207ENST00000489402 NEDD9Q14511 834 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 TTC22Q5TAA0 569 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 CATIPQ7Z7H3 387 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 FBXO22Q8NEZ5 403 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 SEPT8Q92599 483 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 CUL5Q93034 780 aa10.82□□□□□ -0.68
SNX17-207ENST00000489402 ZNF215Q9UL58 517 aaPredicted RBP10.82□□□□□ -0.68
SNX17-207ENST00000489402 FIBPO43427 364 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 CYP21A2P08686 494 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 ICAM3P32942 547 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 KIF5BP33176 963 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 PTPROQ16827 1216 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 PLEKHG4Q58EX7 1191 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 METTL7BQ6UX53 244 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.81□□□□□ -0.68
SNX17-207ENST00000489402 CYFIP1Q7L576 1253 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 CTCFLQ8NI51 663 aaPredicted RBP10.81□□□□□ -0.68
SNX17-207ENST00000489402 SMARCC2Q8TAQ2 1214 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 PIBF1Q8WXW3 757 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 KHSRPQ92945 711 aaKnown RBP eCLIP10.81□□□□□ -0.68
SNX17-207ENST00000489402 SAMD11Q96NU1 681 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 INPP4AQ96PE3 977 aaPredicted RBP10.81□□□□□ -0.68
SNX17-207ENST00000489402 RNPEPQ9H4A4 650 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 UBE2ZQ9H832 354 aaPredicted RBP10.81□□□□□ -0.68
SNX17-207ENST00000489402 SUPT16HQ9Y5B9 1047 aaKnown RBP10.81□□□□□ -0.68
SNX17-207ENST00000489402 FRMPD4Q14CM0 1322 aa10.81□□□□□ -0.68
SNX17-207ENST00000489402 SPATA31C2B4DYI2 1134 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 E7EWF7 191 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 TREHO43280 583 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 CTSHP09668 335 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 HOXC8P31273 242 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 HTRA4P83105 476 aaPredicted RBP10.8□□□□□ -0.68
SNX17-207ENST00000489402 TROAPQ12815 778 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 NLRX1Q86UT6 975 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 SKAP1Q86WV1 359 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 GIMAP8Q8ND71 665 aaPredicted RBP10.8□□□□□ -0.68
SNX17-207ENST00000489402 APBB2Q92870 758 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 FAM122AQ96E09 287 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 RRP36Q96EU6 259 aaKnown RBP10.8□□□□□ -0.68
SNX17-207ENST00000489402 YME1L1Q96TA2 773 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 C17orf80Q9BSJ5 609 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 RTEL1Q9NZ71 1219 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 SEC63Q9UGP8 760 aaKnown RBP10.8□□□□□ -0.68
SNX17-207ENST00000489402 HCN4Q9Y3Q4 1203 aa10.8□□□□□ -0.68
SNX17-207ENST00000489402 KAT6AQ92794 2004 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 RALGAPA2Q2PPJ7 1873 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 NLRC5Q86WI3 1866 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 DDAH1O94760 285 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 UPP2O95045 317 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 CHMLP26374 656 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 PLA2G5P39877 138 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 ANTXR2P58335 489 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 MRPS9P82933 396 aaKnown RBP10.79□□□□□ -0.68
SNX17-207ENST00000489402 ARHGAP4P98171 946 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 SP4Q02446 784 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 SEMA3FQ13275 785 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 MKRN4PQ13434 485 aaPredicted RBP10.79□□□□□ -0.68
SNX17-207ENST00000489402 TIGD5Q53EQ6 642 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 TMEM31Q5JXX7 168 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 UTP14CQ5TAP6 766 aaKnown RBP10.79□□□□□ -0.68
SNX17-207ENST00000489402 PCNX4Q63HM2 1172 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 XRRA1Q6P2D8 792 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 CASC1Q6TDU7 716 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
SNX17-207ENST00000489402 MRPL38Q96DV4 380 aaKnown RBP10.79□□□□□ -0.68
SNX17-207ENST00000489402 GPR20Q99678 358 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 EPHX3Q9H6B9 360 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 SETD4Q9NVD3 440 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 COL4A6Q14031 1691 aa10.79□□□□□ -0.68
SNX17-207ENST00000489402 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms