RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 DCAF4Q8WV16 495 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 TRIB2Q92519 343 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 COA7Q96BR5 231 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 ZNF333Q96JL9 665 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 UBAC1Q9BSL1 405 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 HOXC10Q9NYD6 342 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 FEM1BQ9UK73 627 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 PRR12Q9ULL5 1215 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 DDX49Q9Y6V7 483 aaKnown RBP9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 CUL9Q8IWT3 2517 aa9.11□□□□□ -0.95
NECTIN3-209ENST00000488016 RANBP2P49792 3224 aaKnown RBP9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 DCDC2BA2VCK2 349 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 PRC1O43663 620 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 COBLO75128 1261 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 SNHG28P0DPA3 235 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 MAPK4P31152 587 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 GRK4P32298 578 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 STAT3P40763 770 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 STAT2P52630 851 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 ZNF543Q08ER8 600 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 TRDNQ13061 729 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 TMEM67Q5HYA8 995 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 IFIT1BQ5T764 474 aaKnown RBP9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 SYDE2Q5VT97 1194 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 CASC1Q6TDU7 716 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 CCDC144CPQ8IYA2 1237 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 PRPF38AQ8NAV1 312 aaKnown RBP9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 GTF3C2Q8WUA4 911 aaPredicted RBP9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 USP6NLQ92738 828 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 GLMNQ92990 594 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 ARMC5Q96C12 935 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 BACH2Q9BYV9 841 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 KAT14Q9H8E8 782 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 CNNM2Q9H8M5 875 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 SLC38A10Q9HBR0 1119 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 BIN2Q9UBW5 565 aaPredicted RBP9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 ZNF232Q9UNY5 417 aa9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 KIAA0100Q14667 2235 aaKnown RBP9.1□□□□□ -0.95
NECTIN3-209ENST00000488016 SH2B2O14492 632 aaPredicted RBP9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 ZBED4O75132 1171 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 HOXD10P28358 340 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 ADORA2AP29274 412 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 CCNA1P78396 465 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 CTBSQ01459 385 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 GRB14Q14449 540 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 WTAPQ15007 396 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 TEAD4Q15561 434 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 MUM1L1Q5H9M0 696 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 NBPF11Q86T75 865 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 DGKHQ86XP1 1220 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 RIOX2Q8IUF8 465 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 CMTR1Q8N1G2 835 aaKnown RBP9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 MB21D1Q8N884 522 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 GALNT6Q8NCL4 622 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 IGDCC4Q8TDY8 1250 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 PIBF1Q8WXW3 757 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 ANKS1AQ92625 1134 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 LY9Q9HBG7 655 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 VAT1LQ9HCJ6 419 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 KIAA1024Q9UPX6 916 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 SNX14Q9Y5W7 946 aa9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 DNMT3AQ9Y6K1 912 aaPredicted RBP9.09□□□□□ -0.95
NECTIN3-209ENST00000488016 CNTNAP5Q8WYK1 1306 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 BAZ2BQ9UIF8 2168 aaKnown RBP9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 PALM3A6NDB9 673 aaPredicted RBP9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 H0YGN5 161 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 KHNYNO15037 678 aaKnown RBP9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 ALAS1P13196 640 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 CCL5P13501 91 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 CYP2C19P33261 490 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 HSPA4P34932 840 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 TXLNAP40222 546 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 EPHA4P54764 986 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 CLDN10P78369 228 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 FOXK2Q01167 660 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 ARHGEF6Q15052 776 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 NUP133Q8WUM0 1156 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 EDARADDQ8WWZ3 215 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 JAKMIP1Q96N16 626 aaKnown RBP9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 TTC14Q96N46 770 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 MMP19Q99542 508 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 TEX13BQ9BXU2 312 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 RANBP17Q9H2T7 1088 aaKnown RBP9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 RNF146Q9NTX7 359 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 MAD2L2Q9UI95 211 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 SYNPO2Q9UMS6 1093 aa9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 CTDP1Q9Y5B0 961 aaPredicted RBP9.08□□□□□ -0.96
NECTIN3-209ENST00000488016 LCTP09848 1927 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 CEP290O15078 2479 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 SERTM1A2A2V5 107 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 SLC15A5A6NIM6 579 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 NFIBO00712 420 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 DTNBO60941 627 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 PLEKHA8P1O95397 391 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 PARP1P09874 1014 aaKnown RBP9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 MAPTP10636 758 aaKnown RBP9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 ZKSCAN1P17029 563 aaPredicted RBP9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 AMPD1P23109 780 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 CCND3P30281 292 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms