RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ALG1Q9BT22 464 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PRRC2BQ5JSZ5 2229 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 NBNO60934 754 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PPFIA4O75335 1185 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ARHGEF15O94989 841 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CXCL10P02778 98 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CKBP12277 381 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CPA1P15085 419 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SELPP16109 830 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ZNF200P98182 395 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 MBTPS1Q14703 1052 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 DHX32Q7L7V1 743 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SERINC5Q86VE9 423 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CCDC82Q8N4S0 544 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 C7orf31Q8N865 590 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 KCNB2Q92953 911 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 GPR20Q99678 358 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PRDM12Q9H4Q4 367 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 FAM217BQ9NTX9 383 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PCDHA11Q9Y5I1 949 aa12.91□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TTC28Q96AY4 2481 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ZBTB43O43298 467 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SMIM10L2AP0DMW4 78 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SMIM10L2BP0DMW5 78 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 KCNA2P16389 499 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ITGB5P18084 799 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PTK7Q13308 1070 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 RTN1Q16799 776 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 XRRA1Q6P2D8 792 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 HEATR3Q7Z4Q2 680 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 RETREG2Q8NC44 543 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CUL5Q93034 780 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SLC9A7Q96T83 725 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 MLXIPQ9HAP2 919 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 MSRAQ9UJ68 235 aa12.9□□□□□ -0.34
RAB11FIP3-210ENST00000487899 EVPLQ92817 2033 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 KLF18A0A0U1RQI7 1052 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 H3BRB1 525 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 STXBP3O00186 592 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 NOP56O00567 594 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 BAIAP3O94812 1187 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CA3P07451 260 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ACTN1P12814 892 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CDC27P30260 824 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 HSPA4P34932 840 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 WDR5P61964 334 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 NEDD9Q14511 834 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 KRT32Q14532 448 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ZNF618Q5T7W0 954 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PPP2R2DQ66LE6 453 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PPP1R18Q6NYC8 613 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 GPRASP2Q96D09 838 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SENP7Q9BQF6 1050 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TUT1Q9H6E5 874 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PSTPIP2Q9H939 334 aa12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-210ENST00000487899 GOLGA8AA7E2F4 631 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 GOLGA8BA8MQT2 603 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ATP9AO75110 1047 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 RCAN1P53805 252 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ADAM17P78536 824 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 DEFB103AP81534 67 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CNKSR3Q6P9H4 555 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SPRED2Q7Z698 418 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 HERC6Q8IVU3 1022 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SLC28A3Q9HAS3 691 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SNX14Q9Y5W7 946 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 UBIAD1Q9Y5Z9 338 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 BRWD1Q9NSI6 2320 aa12.88□□□□□ -0.35
RAB11FIP3-210ENST00000487899 EPOPA6NHQ4 379 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SPDYE3A6NKU9 549 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TREHO43280 583 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PARNO95453 639 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 CLK2P49760 499 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 NAPAP54920 295 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 SP4Q02446 784 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 MTMR1Q13613 665 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TMCO2Q7Z6W1 182 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 NLRX1Q86UT6 975 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 LMBR1Q8WVP7 490 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PGBD1Q96JS3 809 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 GAS2L1Q99501 681 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 USP26Q9BXU7 913 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 RIC8AQ9NPQ8 531 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PCDHA6Q9UN73 950 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 PCDHA8Q9Y5H6 950 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 TCF20Q9UGU0 1960 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 EMSYQ7Z589 1322 aa12.87□□□□□ -0.35
RAB11FIP3-210ENST00000487899 ARID2Q68CP9 1835 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 BDP1A6H8Y1 2624 aa12.86□□□□□ -0.35
RAB11FIP3-210ENST00000487899 C17orf102A2RUQ5 167 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms