RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 BLIDQ8IZY5 108 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 TMEM199Q8N511 208 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 FAM184AQ8NB25 1140 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
LCN2-205ENST00000487719 PGBD1Q96JS3 809 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 NAP1L4Q99733 375 aaKnown RBP10.65□□□□□ -0.7
LCN2-205ENST00000487719 AZI2Q9H6S1 392 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 JPH1Q9HDC5 661 aaPredicted RBP10.65□□□□□ -0.7
LCN2-205ENST00000487719 TMEM260Q9NX78 707 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.7
LCN2-205ENST00000487719 SCN5AQ14524 2016 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 KIAA0355O15063 1070 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 ZNF286BP0CG31 522 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 GNAT1P11488 350 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 ITGB5P18084 799 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 PTGS1P23219 599 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 BMP8BP34820 402 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 PSEN2P49810 448 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 CDK7P50613 346 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 HMGN5P82970 282 aaKnown RBP10.64□□□□□ -0.71
LCN2-205ENST00000487719 FAAP100Q0VG06 881 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 PPIGQ13427 754 aaKnown RBP eCLIP10.64□□□□□ -0.71
LCN2-205ENST00000487719 BFSP2Q13515 415 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 MFSD10Q14728 455 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 NONOQ15233 471 aaKnown RBP eCLIP10.64□□□□□ -0.71
LCN2-205ENST00000487719 KIAA0753Q2KHM9 967 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 HSDL1Q3SXM5 330 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 PLA2G4DQ86XP0 818 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 NECAB1Q8N987 351 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 RETREG2Q8NC44 543 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 DAGLBQ8NCG7 672 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 LLPHQ9BRT6 129 aaKnown RBP10.64□□□□□ -0.71
LCN2-205ENST00000487719 ALG1Q9BT22 464 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 MTIF3Q9H2K0 278 aaKnown RBP10.64□□□□□ -0.71
LCN2-205ENST00000487719 HIPK3Q9H422 1215 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 KCNH7Q9NS40 1196 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 PKD2L1Q9P0L9 805 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 SLC9A2Q9UBY0 812 aa10.64□□□□□ -0.71
LCN2-205ENST00000487719 COLQQ9Y215 455 aaPredicted RBP10.64□□□□□ -0.71
LCN2-205ENST00000487719 NFASCO94856 1347 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 H3BRB1 525 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 F2P00734 622 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 TIMP1P01033 207 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 LGALS2P05162 132 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 CYP3A4P08684 503 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 HOXD8P13378 290 aaPredicted RBP10.63□□□□□ -0.71
LCN2-205ENST00000487719 USP11P51784 963 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 SP2Q02086 613 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 FPGSQ05932 587 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 GNL2Q13823 731 aaKnown RBP10.63□□□□□ -0.71
LCN2-205ENST00000487719 PTGISQ16647 500 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 UTP14CQ5TAP6 766 aaKnown RBP10.63□□□□□ -0.71
LCN2-205ENST00000487719 CCDC83Q8IWF9 413 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 TDHQ8IZJ6 230 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 SLC43A3Q8NBI5 491 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 SEPT1Q8WYJ6 367 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 GLG1Q92896 1179 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 GPR20Q99678 358 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 GDF15Q99988 308 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 ZNF577Q9BSK1 485 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
LCN2-205ENST00000487719 TBC1D22BQ9NU19 505 aa10.63□□□□□ -0.71
LCN2-205ENST00000487719 IPO5O00410 1097 aaKnown RBP10.62□□□□□ -0.71
LCN2-205ENST00000487719 MEIS1O00470 390 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 MARCH6O60337 910 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 B4GALT4O60513 344 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 KCNA2P16389 499 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 KRT2P35908 639 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 TCF7P36402 384 aaPredicted RBP10.62□□□□□ -0.71
LCN2-205ENST00000487719 SEMA3FQ13275 785 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 PRR16Q569H4 304 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 HABP4Q5JVS0 413 aaKnown RBP10.62□□□□□ -0.71
LCN2-205ENST00000487719 FAM160B1Q5W0V3 765 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 SESTD1Q86VW0 696 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 RPUSD2Q8IZ73 545 aaKnown RBP10.62□□□□□ -0.71
LCN2-205ENST00000487719 CAGE1Q8TC20 777 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 RASGRP4Q8TDF6 673 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 BADQ92934 168 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 TBC1D32Q96NH3 1257 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 PHF20Q9BVI0 1012 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 PPP1R12CQ9BZL4 782 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 SMARCAD1Q9H4L7 1026 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 ERAP1Q9NZ08 941 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 TBX21Q9UL17 535 aa10.62□□□□□ -0.71
LCN2-205ENST00000487719 C17orf102A2RUQ5 167 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 TRIM43BA6NCK2 446 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 BACH1O14867 736 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 PARNO95453 639 aaKnown RBP10.61□□□□□ -0.71
LCN2-205ENST00000487719 LARGE1O95461 756 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 CD4P01730 458 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 GCFC2P16383 781 aaKnown RBP10.61□□□□□ -0.71
LCN2-205ENST00000487719 KRT76Q01546 638 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 MFSD5Q6N075 450 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 MIS18BP1Q6P0N0 1132 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 MOXD1Q6UVY6 613 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 SH3RF1Q7Z6J0 888 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 SMAP1Q8IYB5 467 aaPredicted RBP10.61□□□□□ -0.71
LCN2-205ENST00000487719 NSUN7Q8NE18 718 aaKnown RBP10.61□□□□□ -0.71
LCN2-205ENST00000487719 TBCKQ8TEA7 893 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms