RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 GGPS1O95749 300 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 LTBRP36941 435 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 SP2Q02086 613 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 DLX2Q07687 328 aaPredicted RBP9.78□□□□□ -0.84
HOXA9-204ENST00000487384 NMIQ13287 307 aaPredicted RBP9.78□□□□□ -0.84
HOXA9-204ENST00000487384 MCMDC2Q4G0Z9 681 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 CELF3Q5SZQ8 465 aaKnown RBP9.78□□□□□ -0.84
HOXA9-204ENST00000487384 FBXO11Q86XK2 927 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 ADHFE1Q8IWW8 467 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 SEPT8Q92599 483 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 GPKOWQ92917 476 aaPredicted RBP eCLIP9.78□□□□□ -0.84
HOXA9-204ENST00000487384 TOP1MTQ969P6 601 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 SAMD11Q96NU1 681 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 IFIH1Q9BYX4 1025 aaKnown RBP9.78□□□□□ -0.84
HOXA9-204ENST00000487384 BCAS3Q9H6U6 928 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 MUTYHQ9UIF7 546 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 MRPL11Q9Y3B7 192 aaKnown RBP9.78□□□□□ -0.84
HOXA9-204ENST00000487384 TTC3P53804 2025 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 SALL3Q9BXA9 1300 aa9.78□□□□□ -0.84
HOXA9-204ENST00000487384 PTPRZ1P23471 2315 aaPredicted RBP9.77□□□□□ -0.85
HOXA9-204ENST00000487384 C17orf102A2RUQ5 167 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 OPLAHO14841 1288 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 KDM4AO75164 1064 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 SMIM10L2AP0DMW4 78 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 SMIM10L2BP0DMW5 78 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 HOXD8P13378 290 aaPredicted RBP9.77□□□□□ -0.85
HOXA9-204ENST00000487384 UBA1P22314 1058 aaKnown RBP9.77□□□□□ -0.85
HOXA9-204ENST00000487384 HOXA13P31271 388 aaPredicted RBP9.77□□□□□ -0.85
HOXA9-204ENST00000487384 CTNNB1P35222 781 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
HOXA9-204ENST00000487384 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
HOXA9-204ENST00000487384 IL31RAQ8NI17 732 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 ESR2Q92731 530 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 PDCD2LQ9BRP1 358 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 C16orf70Q9BSU1 422 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 RNPEPQ9H4A4 650 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 IGFLR1Q9H665 355 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 KAT14Q9H8E8 782 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 JMJD4Q9H9V9 463 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 MLXIPQ9HAP2 919 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 PRKAG3Q9UGI9 489 aa9.77□□□□□ -0.85
HOXA9-204ENST00000487384 H3BRB1 525 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 GRM6O15303 877 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 PARP1P09874 1014 aaKnown RBP9.76□□□□□ -0.85
HOXA9-204ENST00000487384 HYAL1Q12794 435 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 COL19A1Q14993 1142 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 ASPRV1Q53RT3 343 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 ANKRD45Q5TZF3 282 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 IQCA1Q86XH1 822 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 DGKHQ86XP1 1220 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 RNF135Q8IUD6 432 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 STAG2Q8N3U4 1231 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 FIBCD1Q8N539 461 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 IL17RAQ96F46 866 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 MFSD14AQ96MC6 490 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 UPF3BQ9BZI7 483 aaKnown RBP9.76□□□□□ -0.85
HOXA9-204ENST00000487384 RNF41Q9H4P4 317 aaPredicted RBP9.76□□□□□ -0.85
HOXA9-204ENST00000487384 TUT1Q9H6E5 874 aaKnown RBP9.76□□□□□ -0.85
HOXA9-204ENST00000487384 SETD4Q9NVD3 440 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 ZBTB47Q9UFB7 747 aaPredicted RBP9.76□□□□□ -0.85
HOXA9-204ENST00000487384 SUPT16HQ9Y5B9 1047 aaKnown RBP9.76□□□□□ -0.85
HOXA9-204ENST00000487384 MYO10Q9HD67 2058 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 ZMYM6O95789 1325 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 CCDC171Q6TFL3 1326 aa9.76□□□□□ -0.85
HOXA9-204ENST00000487384 KMT2EQ8IZD2 1858 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 B4E1Z4 1266 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 ZNF213O14771 459 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 LINC01565O15544 149 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 MBTPS2O43462 519 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 PPP1R11O60927 126 aaPredicted RBP9.75□□□□□ -0.85
HOXA9-204ENST00000487384 TBX10O75333 385 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 LGALS2P05162 132 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 PCP11498 1178 aaKnown RBP9.75□□□□□ -0.85
HOXA9-204ENST00000487384 HSD17B4P51659 736 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 PDE1AP54750 535 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 PGM5Q15124 567 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 SMAD2Q15796 467 aaKnown RBP9.75□□□□□ -0.85
HOXA9-204ENST00000487384 CTC1Q2NKJ3 1217 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 IER5LQ5T953 404 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 VSIG10LQ86VR7 867 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 FCHSD1Q86WN1 690 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 TRIM50Q86XT4 487 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 ENAHQ8N8S7 591 aaPredicted RBP9.75□□□□□ -0.85
HOXA9-204ENST00000487384 SNX27Q96L92 541 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 AMNQ9BXJ7 453 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 MAF1Q9H063 256 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 KCNH6Q9H252 994 aa9.75□□□□□ -0.85
HOXA9-204ENST00000487384 RIF1Q5UIP0 2472 aaKnown RBP9.75□□□□□ -0.85
HOXA9-204ENST00000487384 PLXNA4Q9HCM2 1894 aa9.74□□□□□ -0.85
HOXA9-204ENST00000487384 COL4A6Q14031 1691 aa9.74□□□□□ -0.85
HOXA9-204ENST00000487384 STXBP3O00186 592 aa9.74□□□□□ -0.85
HOXA9-204ENST00000487384 NOP56O00567 594 aaKnown RBP9.74□□□□□ -0.85
HOXA9-204ENST00000487384 NCK2O43639 380 aa9.74□□□□□ -0.85
HOXA9-204ENST00000487384 CCND2P30279 289 aa9.74□□□□□ -0.85
HOXA9-204ENST00000487384 HOXC8P31273 242 aa9.74□□□□□ -0.85
HOXA9-204ENST00000487384 BMPR1AP36894 532 aa9.74□□□□□ -0.85
HOXA9-204ENST00000487384 SP4Q02446 784 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms