RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 TXNRD1Q16881 649 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 ISCA1Q9BUE6 129 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SAP30BPQ9UHR5 308 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 DAPK3O43293 454 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 RAD51CO43502 376 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 FAM13AO94988 1023 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 FSBPO95073 299 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 C10orf76Q5T2E6 689 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 PDXDC1Q6P996 788 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 GPBP1Q86WP2 473 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 ARHGEF2Q92974 986 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 STMN2Q93045 179 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 CAVIN3Q969G5 261 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 CCDC97Q96F63 343 aaPredicted RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TRIM9Q9C026 710 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 NT5C3AQ9H0P0 336 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SMIM24O75264 130 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TRIM37O94972 964 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 LDHBP07195 334 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 HIBADHP31937 336 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 CHRNDQ07001 517 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 LRIG3Q6UXM1 1119 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 UNC13DQ70J99 1090 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 GSTA5Q7RTV2 222 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TBCKQ8TEA7 893 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 DDX17Q92841 729 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 HPS3Q969F9 1004 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 ERGIC2Q96RQ1 377 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SEC31BQ9NQW1 1179 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 A0A1W2PQJ5 194 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SSU72P8A0A1W2PR75 194 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 FGGP02679 453 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 POTEJP0CG39 1038 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SCP2P22307 547 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 NR2F2P24468 414 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PBX1P40424 430 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 RASSF2P50749 326 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 TMEM132AQ24JP5 1023 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 MUM1Q2TAK8 710 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CREG2Q8IUH2 290 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PRPF38AQ8NAV1 312 aaKnown RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 RUNDC3BQ96NL0 473 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 AMACRQ9UHK6 382 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 RASGRF2O14827 1237 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 GLI1P08151 1106 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PDE6CP51160 858 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZNF131P52739 623 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 DR1Q01658 176 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ARHGAP44Q17R89 818 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PARP10Q53GL7 1025 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 TTMPQ5BVD1 217 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 NUGGCQ68CJ6 796 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SRBD1Q8N5C6 995 aaKnown RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 EDEM3Q9BZQ6 932 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CCSER1Q9C0I3 900 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PCDHA12Q9UN75 941 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 NMT2O60551 498 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ITIH3Q06033 890 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CRYMQ14894 314 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CAPRIN2Q6IMN6 1127 aaKnown RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SH3RF1Q7Z6J0 888 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 GBP7Q8N8V2 638 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CASKIN2Q8WXE0 1202 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 TFCP2L1Q9NZI6 479 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 FRMD4BQ9Y2L6 1034 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ADAMTS13Q76LX8 1427 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CFAP73A6NFT4 308 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZKSCAN4Q969J2 545 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 YIPF3Q9GZM5 350 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 BATF3Q9NR55 127 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ATP8A2Q9NTI2 1148 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SNX24Q9Y343 169 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZSCAN5CA6NGD5 496 aaPredicted RBP8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 GCNT3O95395 438 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 HSD17B3P37058 310 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 CASP7P55210 303 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 PSMD2Q13200 908 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 TTI2Q6NXR4 508 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 SLF2Q8IX21 1173 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 GUF1Q8N442 669 aaKnown RBP8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 SPATA20Q8TB22 786 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 REXO2Q9Y3B8 237 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms