RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 TXNRD1Q16881 649 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 ISCA1Q9BUE6 129 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SAP30BPQ9UHR5 308 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 DAPK3O43293 454 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 RAD51CO43502 376 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 FAM13AO94988 1023 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 FSBPO95073 299 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 C10orf76Q5T2E6 689 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 PDXDC1Q6P996 788 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 GPBP1Q86WP2 473 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 ARHGEF2Q92974 986 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 STMN2Q93045 179 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 CAVIN3Q969G5 261 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 CCDC97Q96F63 343 aaPredicted RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TRIM9Q9C026 710 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 NT5C3AQ9H0P0 336 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SMIM24O75264 130 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TRIM37O94972 964 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 LDHBP07195 334 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 HIBADHP31937 336 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 CHRNDQ07001 517 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 LRIG3Q6UXM1 1119 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 UNC13DQ70J99 1090 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 GSTA5Q7RTV2 222 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TBCKQ8TEA7 893 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 DDX17Q92841 729 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 HPS3Q969F9 1004 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 ERGIC2Q96RQ1 377 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SEC31BQ9NQW1 1179 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 A0A1W2PQJ5 194 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SSU72P8A0A1W2PR75 194 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 FGGP02679 453 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 POTEJP0CG39 1038 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SCP2P22307 547 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 NR2F2P24468 414 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PBX1P40424 430 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 RASSF2P50749 326 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 TMEM132AQ24JP5 1023 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 MUM1Q2TAK8 710 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CREG2Q8IUH2 290 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PRPF38AQ8NAV1 312 aaKnown RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 RUNDC3BQ96NL0 473 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 AMACRQ9UHK6 382 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 RASGRF2O14827 1237 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 GLI1P08151 1106 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PDE6CP51160 858 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZNF131P52739 623 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 DR1Q01658 176 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ARHGAP44Q17R89 818 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PARP10Q53GL7 1025 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 TTMPQ5BVD1 217 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 NUGGCQ68CJ6 796 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SRBD1Q8N5C6 995 aaKnown RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 EDEM3Q9BZQ6 932 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CCSER1Q9C0I3 900 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PCDHA12Q9UN75 941 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 NMT2O60551 498 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ITIH3Q06033 890 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CRYMQ14894 314 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CAPRIN2Q6IMN6 1127 aaKnown RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SH3RF1Q7Z6J0 888 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 GBP7Q8N8V2 638 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CASKIN2Q8WXE0 1202 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 TFCP2L1Q9NZI6 479 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 FRMD4BQ9Y2L6 1034 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ADAMTS13Q76LX8 1427 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CFAP73A6NFT4 308 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZKSCAN4Q969J2 545 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 YIPF3Q9GZM5 350 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 BATF3Q9NR55 127 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ATP8A2Q9NTI2 1148 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 SNX24Q9Y343 169 aa8.35□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZSCAN5CA6NGD5 496 aaPredicted RBP8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 GCNT3O95395 438 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 HSD17B3P37058 310 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 CASP7P55210 303 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 PSMD2Q13200 908 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 TTI2Q6NXR4 508 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 SLF2Q8IX21 1173 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 GUF1Q8N442 669 aaKnown RBP8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 SPATA20Q8TB22 786 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL6A4P1-202ENST00000487147 REXO2Q9Y3B8 237 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms