RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MTMR3Q13615 1198 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 HELBQ8NG08 1087 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 TLCD1Q96CP7 247 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 CNOT10Q9H9A5 744 aaKnown RBP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 NOP53Q9NZM5 478 aaKnown RBP11.68□□□□□ -0.54
CCDC171-208ENST00000486641 PNMA2Q9UL42 364 aa11.68□□□□□ -0.54
CCDC171-208ENST00000486641 CFAP73A6NFT4 308 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 ASAP2O43150 1006 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 DAPK3O43293 454 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 SCG2P13521 617 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 ALADP13716 330 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 CHN1P15882 459 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 KCNJ2P63252 427 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 ASIC1P78348 528 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 KCNMA1Q12791 1236 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 ITIH4Q14624 930 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 MAN2A1Q16706 1144 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 TMC3Q7Z5M5 1100 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 KIAA0895Q8NCT3 520 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 RASGRP4Q8TDF6 673 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 SDR42E1Q8WUS8 393 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 PACSIN1Q9BY11 444 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 CCSER1Q9C0I3 900 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 SLC5A4Q9NY91 659 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 FAM205AQ6ZU69 1335 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 PNPLA7Q6ZV29 1317 aa11.67□□□□□ -0.54
CCDC171-208ENST00000486641 F8VZ95 297 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 CAND2O75155 1236 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 AP1G2O75843 785 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 PLCG1P19174 1290 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 DHX9Q08211 1270 aaKnown RBP11.66□□□□□ -0.54
CCDC171-208ENST00000486641 SLC9C1Q4G0N8 1177 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 CENPPQ6IPU0 288 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 TRPM8Q7Z2W7 1104 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 LRRC34Q8IZ02 419 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-208ENST00000486641 CCDC26Q8TAB7 109 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 TBC1D5Q92609 795 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 TAF4BQ92750 862 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 ELAC2Q9BQ52 826 aaKnown RBP11.66□□□□□ -0.54
CCDC171-208ENST00000486641 DDX47Q9H0S4 455 aaKnown RBP11.66□□□□□ -0.54
CCDC171-208ENST00000486641 HOMER3Q9NSC5 361 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 ETAA1Q9NY74 926 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 CORO1CQ9ULV4 474 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-208ENST00000486641 ZNF330Q9Y3S2 320 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-208ENST00000486641 BCORQ6W2J9 1755 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 MYH1P12882 1939 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 A0A0G2JS52 829 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 SNAP23O00161 211 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 CEP104O60308 925 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 MMEP08473 750 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 NQO1P15559 274 aaKnown RBP11.66□□□□□ -0.54
CCDC171-208ENST00000486641 SLMAPQ14BN4 828 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 RPS6KA1Q15418 735 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 KIAA0753Q2KHM9 967 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 THEMIS2Q5TEJ8 643 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 SPICE1Q8N0Z3 855 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 PRCCQ92733 491 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-208ENST00000486641 C7orf25Q9BPX7 421 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 YIPF3Q9GZM5 350 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 MTFR1LQ9H019 292 aa11.66□□□□□ -0.54
CCDC171-208ENST00000486641 SERPING1P05155 500 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 CALM1P0DP23 149 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 CALM2P0DP24 149 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 CALM3P0DP25 149 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 ALDH5A1P51649 535 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-208ENST00000486641 PTPROQ16827 1216 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 PFKFB3Q16875 520 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-208ENST00000486641 SFMBT2Q5VUG0 894 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 BLIDQ8IZY5 108 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 ATXN2LQ8WWM7 1075 aaKnown RBP11.65□□□□□ -0.54
CCDC171-208ENST00000486641 ANKS1AQ92625 1134 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC171-208ENST00000486641 GOLPH3Q9H4A6 298 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 ABCF3Q9NUQ8 709 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 AMACRQ9UHK6 382 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 A0A087X0T9 212 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 CYP2D7A0A087X1C5 515 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 CES2O00748 559 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 NOL4O94818 638 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 LINGO3P0C6S8 592 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 FAM228BP0C875 321 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 CCND1P24385 295 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 FAM43BQ6ZT52 329 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-208ENST00000486641 ACTRT1Q8TDG2 376 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 CNKSR1Q969H4 720 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 GGT7Q9UJ14 662 aa11.65□□□□□ -0.54
CCDC171-208ENST00000486641 AFF2P51816 1311 aa11.65□□□□□ -0.55
CCDC171-208ENST00000486641 A8MUI8 341 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 UBOX5O94941 541 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 SNUPNO95149 360 aaKnown RBP11.64□□□□□ -0.55
CCDC171-208ENST00000486641 KIF4AO95239 1232 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 RARAP10276 462 aa11.64□□□□□ -0.55
CCDC171-208ENST00000486641 ITGA4P13612 1032 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms