RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CYFIP1Q7L576 1253 aa22.21■■□□□ 1.15
COL27A1-205ENST00000485397 ATP6V0A1Q93050 837 aa22.21■■□□□ 1.15
COL27A1-205ENST00000485397 NECAB3Q96P71 396 aaPredicted RBP22.21■■□□□ 1.15
COL27A1-205ENST00000485397 MAP3K14Q99558 947 aa22.21■■□□□ 1.15
COL27A1-205ENST00000485397 SPZ1Q9BXG8 430 aa22.21■■□□□ 1.15
COL27A1-205ENST00000485397 RNPEPQ9H4A4 650 aa22.21■■□□□ 1.15
COL27A1-205ENST00000485397 RSPH10B2B2RC85 870 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 NOP56O00567 594 aaKnown RBP22.2■■□□□ 1.14
COL27A1-205ENST00000485397 TREHO43280 583 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 PRC1O43663 620 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 DDAH1O94760 285 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 RSPH10BP0C881 870 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 KCNQ1P51787 676 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 NEDD9Q14511 834 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 CASC1Q6TDU7 716 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 METTL7BQ6UX53 244 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.2■■□□□ 1.14
COL27A1-205ENST00000485397 DBF4BQ8NFT6 615 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 SMARCC2Q8TAQ2 1214 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 RRP36Q96EU6 259 aaKnown RBP22.2■■□□□ 1.14
COL27A1-205ENST00000485397 RAD9AQ99638 391 aa22.2■■□□□ 1.14
COL27A1-205ENST00000485397 MEIS2O14770 477 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 FIBPO43427 364 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 EFCAB14O75071 495 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 STAM2O75886 525 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 PLEKHA8P1O95397 391 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 HOXC8P31273 242 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 KIF5BP33176 963 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 CMTR1Q8N1G2 835 aaKnown RBP22.19■■□□□ 1.14
COL27A1-205ENST00000485397 SRBD1Q8N5C6 995 aaKnown RBP22.19■■□□□ 1.14
COL27A1-205ENST00000485397 GDPD5Q8WTR4 605 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 GPR20Q99678 358 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 LSG1Q9H089 658 aaKnown RBP22.19■■□□□ 1.14
COL27A1-205ENST00000485397 MTUS1Q9ULD2 1270 aa22.19■■□□□ 1.14
COL27A1-205ENST00000485397 TCF20Q9UGU0 1960 aaKnown RBP22.18■■□□□ 1.14
COL27A1-205ENST00000485397 SH2B2O14492 632 aaPredicted RBP22.18■■□□□ 1.14
COL27A1-205ENST00000485397 RXRAP19793 462 aa22.18■■□□□ 1.14
COL27A1-205ENST00000485397 NFXL1Q6ZNB6 911 aa22.18■■□□□ 1.14
COL27A1-205ENST00000485397 TRIM50Q86XT4 487 aa22.18■■□□□ 1.14
COL27A1-205ENST00000485397 CUL5Q93034 780 aa22.18■■□□□ 1.14
COL27A1-205ENST00000485397 USP26Q9BXU7 913 aa22.18■■□□□ 1.14
COL27A1-205ENST00000485397 OSBPL7Q9BZF2 842 aa22.18■■□□□ 1.14
COL27A1-205ENST00000485397 SETD4Q9NVD3 440 aa22.18■■□□□ 1.14
COL27A1-205ENST00000485397 EMSYQ7Z589 1322 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 LINC01553A4QN01 128 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 SMARCA1P28370 1054 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 SP4Q02446 784 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 AAK1Q2M2I8 961 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 UTP14CQ5TAP6 766 aaKnown RBP22.17■■□□□ 1.14
COL27A1-205ENST00000485397 PCNX4Q63HM2 1172 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 RAB11FIP4Q86YS3 637 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 LZTS2Q9BRK4 669 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 MTA3Q9BTC8 594 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 SUGCTQ9HAC7 445 aa22.17■■□□□ 1.14
COL27A1-205ENST00000485397 SEC63Q9UGP8 760 aaKnown RBP22.17■■□□□ 1.14
COL27A1-205ENST00000485397 CCDC69A6NI79 296 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 PIK3CDO00329 1044 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 SLC27A2O14975 620 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 CTSHP09668 335 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 MCM5P33992 734 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 GNAQP50148 359 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 ERVK-21P61565 698 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 MKRN4PQ13434 485 aaPredicted RBP22.16■■□□□ 1.14
COL27A1-205ENST00000485397 PLEKHG4Q58EX7 1191 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 MYOCDQ8IZQ8 938 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 TGS1Q96RS0 853 aaKnown RBP22.16■■□□□ 1.14
COL27A1-205ENST00000485397 COG5Q9UP83 839 aa22.16■■□□□ 1.14
COL27A1-205ENST00000485397 hCG_1642624A0A1W2PR95 340 aa22.15■■□□□ 1.14
COL27A1-205ENST00000485397 XRRA1Q6P2D8 792 aa22.15■■□□□ 1.14
COL27A1-205ENST00000485397 NLRX1Q86UT6 975 aa22.15■■□□□ 1.14
COL27A1-205ENST00000485397 TMTC2Q8N394 836 aa22.15■■□□□ 1.14
COL27A1-205ENST00000485397 TMEM87BQ96K49 555 aa22.15■■□□□ 1.14
COL27A1-205ENST00000485397 SENP7Q9BQF6 1050 aa22.15■■□□□ 1.14
COL27A1-205ENST00000485397 LRRC2Q9BYS8 371 aa22.15■■□□□ 1.14
COL27A1-205ENST00000485397 DOCK5Q9H7D0 1870 aa22.15■■□□□ 1.14
COL27A1-205ENST00000485397 COL4A4P53420 1690 aaPredicted RBP22.14■■□□□ 1.14
COL27A1-205ENST00000485397 AMHP03971 560 aa22.14■■□□□ 1.13
COL27A1-205ENST00000485397 CREB3L3Q68CJ9 461 aa22.14■■□□□ 1.13
COL27A1-205ENST00000485397 HLA-CQ95604 372 aa22.14■■□□□ 1.13
COL27A1-205ENST00000485397 ESYT1Q9BSJ8 1104 aa22.14■■□□□ 1.13
COL27A1-205ENST00000485397 INSL6Q9Y581 213 aa22.14■■□□□ 1.13
COL27A1-205ENST00000485397 ATP9AO75110 1047 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 GNAT1P11488 350 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 LIFRP42702 1097 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 ADAM17P78536 824 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 ARHGAP4P98171 946 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 CCDC82Q8N4S0 544 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 SEPT8Q92599 483 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 C17orf80Q9BSJ5 609 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 PSTPIP2Q9H939 334 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 LMCD1Q9NZU5 365 aa22.13■■□□□ 1.13
COL27A1-205ENST00000485397 ZNF215Q9UL58 517 aaPredicted RBP22.13■■□□□ 1.13
COL27A1-205ENST00000485397 NCOR1O75376 2440 aa22.12■■□□□ 1.13
COL27A1-205ENST00000485397 CAND2O75155 1236 aa22.12■■□□□ 1.13
COL27A1-205ENST00000485397 HTRA4P83105 476 aaPredicted RBP22.12■■□□□ 1.13
COL27A1-205ENST00000485397 NECTIN1Q15223 517 aa22.12■■□□□ 1.13
COL27A1-205ENST00000485397 UBE2SQ16763 222 aa22.12■■□□□ 1.13
COL27A1-205ENST00000485397 LMBR1Q8WVP7 490 aa22.12■■□□□ 1.13
COL27A1-205ENST00000485397 MUC3AQ02505 3323 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 CALM1P0DP23 149 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms