RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 THBS2P35442 1172 aa7.54□□□□□ -1.2
CCDC66-219ENST00000484441 EPHA5P54756 1037 aa7.54□□□□□ -1.2
CCDC66-219ENST00000484441 SLURP1P55000 103 aa7.54□□□□□ -1.2
CCDC66-219ENST00000484441 SPIRE1Q08AE8 756 aa7.54□□□□□ -1.2
CCDC66-219ENST00000484441 PRR31Q5SQ13 230 aa7.54□□□□□ -1.2
CCDC66-219ENST00000484441 TEPPQ6URK8 271 aa7.54□□□□□ -1.2
CCDC66-219ENST00000484441 TRIM48Q8IWZ4 208 aa7.54□□□□□ -1.2
CCDC66-219ENST00000484441 ZBTB8AQ96BR9 441 aa7.54□□□□□ -1.2
CCDC66-219ENST00000484441 NKRFO15226 690 aaKnown RBP eCLIP7.53□□□□□ -1.2
CCDC66-219ENST00000484441 HOXA5P20719 270 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 NKX3-2P78367 333 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 PAK1Q13153 545 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 ADAM9Q13443 819 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 CARFQ8N187 725 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 TTLL6Q8N841 843 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 PCDH19Q8TAB3 1148 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 CLEC4DQ8WXI8 215 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 LNPKQ9C0E8 428 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 TELO2Q9Y4R8 837 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 PTCH2Q9Y6C5 1203 aa7.53□□□□□ -1.2
CCDC66-219ENST00000484441 A0A1B0GTL3 188 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 SLC27A2O14975 620 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 EFCAB14O75071 495 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 MTDHQ86UE4 582 aaKnown RBP7.52□□□□□ -1.21
CCDC66-219ENST00000484441 PROSER1Q86XN7 944 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 ADGRG2Q8IZP9 1017 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 KCNJ15Q99712 375 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 YIPF4Q9BSR8 244 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 MRPL4Q9BYD3 311 aaKnown RBP7.52□□□□□ -1.21
CCDC66-219ENST00000484441 ZCCHC4Q9H5U6 513 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 SLC52A2Q9HAB3 445 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 NTMQ9P121 344 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 WASF3Q9UPY6 502 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 NUB1Q9Y5A7 615 aa7.52□□□□□ -1.21
CCDC66-219ENST00000484441 A0A0G2JLL6 359 aaPredicted RBP7.51□□□□□ -1.21
CCDC66-219ENST00000484441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.51□□□□□ -1.21
CCDC66-219ENST00000484441 TCRBV5S4A2TA0A5A2 114 aa7.51□□□□□ -1.21
CCDC66-219ENST00000484441 SASH1O94885 1247 aa7.51□□□□□ -1.21
CCDC66-219ENST00000484441 COL6A2P12110 1019 aa7.51□□□□□ -1.21
CCDC66-219ENST00000484441 RPL13P26373 211 aaKnown RBP7.51□□□□□ -1.21
CCDC66-219ENST00000484441 TUSC3Q13454 348 aa7.51□□□□□ -1.21
CCDC66-219ENST00000484441 SMAD4Q13485 552 aaKnown RBP7.51□□□□□ -1.21
CCDC66-219ENST00000484441 BMS1Q14692 1282 aaKnown RBP7.51□□□□□ -1.21
CCDC66-219ENST00000484441 SH3RF2Q8TEC5 729 aa7.51□□□□□ -1.21
CCDC66-219ENST00000484441 C20orf173Q96LM9 149 aa7.51□□□□□ -1.21
CCDC66-219ENST00000484441 DSEQ9UL01 958 aa7.51□□□□□ -1.21
CCDC66-219ENST00000484441 PCDHA8Q9Y5H6 950 aa7.51□□□□□ -1.21
CCDC66-219ENST00000484441 CRTAMO95727 393 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 KCNC1P48547 511 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 GUCY1A3Q02108 690 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 TTLL7Q6ZT98 887 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 KCTD1Q719H9 257 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 SYT8Q8NBV8 401 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 SLC7A14Q8TBB6 771 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 SPATA25Q9BR10 227 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 RTEL1Q9NZ71 1219 aa7.5□□□□□ -1.21
CCDC66-219ENST00000484441 OTOL1A6NHN0 477 aaPredicted RBP7.49□□□□□ -1.21
CCDC66-219ENST00000484441 SMARCA5O60264 1052 aaPredicted RBP7.49□□□□□ -1.21
CCDC66-219ENST00000484441 LTFP02788 710 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 FAHP16930 419 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 SARSP49591 514 aaKnown RBP7.49□□□□□ -1.21
CCDC66-219ENST00000484441 GPR19Q15760 415 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 LCE1DQ5T752 114 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 C16orf59Q7L2K0 433 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.49□□□□□ -1.21
CCDC66-219ENST00000484441 FEZF2Q8TBJ5 459 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 FBXW5Q969U6 566 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 TMEM209Q96SK2 561 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 ZSWIM4Q9H7M6 989 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 NCOA5Q9HCD5 579 aaKnown RBP7.49□□□□□ -1.21
CCDC66-219ENST00000484441 PCDHA9Q9Y5H5 950 aa7.49□□□□□ -1.21
CCDC66-219ENST00000484441 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 AMY2AP04746 511 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 ZNF28P17035 718 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 AMY2BP19961 511 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 SQSTM1Q13501 440 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 RTP5Q14D33 572 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 CCDC144BQ3MJ40 725 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 PAN2Q504Q3 1202 aaKnown RBP7.48□□□□□ -1.21
CCDC66-219ENST00000484441 ZNF761Q86XN6 746 aaPredicted RBP7.48□□□□□ -1.21
CCDC66-219ENST00000484441 RBM12BQ8IXT5 1001 aaKnown RBP7.48□□□□□ -1.21
CCDC66-219ENST00000484441 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 SCLYQ96I15 445 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 TRIM39Q9HCM9 518 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 NDOR1Q9UHB4 597 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 SFMBT1Q9UHJ3 866 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 CBLCQ9ULV8 474 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 SRPK3Q9UPE1 567 aa7.48□□□□□ -1.21
CCDC66-219ENST00000484441 ZNF561-AS1K7EIQ3 104 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 NOBOXO60393 691 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 CKMP06732 381 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 PYGMP11217 842 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 FIGNQ5HY92 759 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 FRMD5Q7Z6J6 570 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 STK32CQ86UX6 486 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 DTX3Q8N9I9 347 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 ADAMTS17Q8TE56 1095 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 WRNIP1Q96S55 665 aa7.47□□□□□ -1.21
CCDC66-219ENST00000484441 ACOT7O00154 380 aa7.46□□□□□ -1.22
CCDC66-219ENST00000484441 MAN2B1O00754 1011 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms