RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 NSMFQ6X4W1 530 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 HDGFL2Q7Z4V5 671 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 USHBP1Q8N6Y0 703 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 TEX19Q8NA77 164 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 MARCH10Q8NA82 808 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 TTC17Q96AE7 1141 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 RUNDC1Q96C34 613 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 SLC9A7Q96T83 725 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 ZHX3Q9H4I2 956 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 TRIM39Q9HCM9 518 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 TCF7L1Q9HCS4 588 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 CRTAC1Q9NQ79 661 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 MAP3K20Q9NYL2 800 aaKnown RBP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 ZNF69Q9UC07 566 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 PUF60Q9UHX1 559 aaKnown RBP5.57□□□□□ -1.52
PTCD3-214ENST00000483925 LZTS1Q9Y250 596 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 ANKRD6Q9Y2G4 727 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 DAAM1Q9Y4D1 1078 aa5.57□□□□□ -1.52
PTCD3-214ENST00000483925 TNKSO95271 1327 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 A0A0U1RQG5 324 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 SSU72P8A0A1W2PR75 194 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 FAM83GA6ND36 823 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 RASSF10A6NK89 507 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 B4E1Z4 1266 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 HRKO00198 91 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 DNAJA2O60884 412 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 USP2O75604 605 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 SNUPNO95149 360 aaKnown RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 PYGMP11217 842 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 PABPC1P11940 636 aaKnown RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 IGFALSP35858 605 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 PPM1FP49593 454 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 NEK3P51956 506 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 PCBP3P57721 371 aaKnown RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 RNF4P78317 190 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 CFAP100Q494V2 611 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 FAM83BQ5T0W9 1011 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 YOD1Q5VVQ6 348 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 WAPLQ7Z5K2 1190 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 MORC1Q86VD1 984 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 CPXCR1Q8N123 301 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 ZNF655Q8N720 491 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 GPATCH11Q8N954 259 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 DAGLBQ8NCG7 672 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 SIGLEC10Q96LC7 697 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 STRBPQ96SI9 672 aaKnown RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 ELAC2Q9BQ52 826 aaKnown RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 MTA3Q9BTC8 594 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 HDAC8Q9BY41 377 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 TRIM8Q9BZR9 551 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 PTPRHQ9HD43 1115 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 SIRT5Q9NXA8 310 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 NDOR1Q9UHB4 597 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 LUC7L2Q9Y383 392 aaKnown RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 TNPO3Q9Y5L0 923 aaKnown RBP5.56□□□□□ -1.52
PTCD3-214ENST00000483925 IRAK3Q9Y616 596 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 RPS6KL1Q9Y6S9 549 aa5.56□□□□□ -1.52
PTCD3-214ENST00000483925 A0A0G2JLL6 359 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-214ENST00000483925 ERC2O15083 957 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 PRODHO43272 600 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 FOXD2O60548 495 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-214ENST00000483925 KPNA6O60684 536 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 RAG1P15918 1043 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 BPIP17213 487 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 CYP2C19P33261 490 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 GTF2H3Q13889 308 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 SART3Q15020 963 aaKnown RBP5.55□□□□□ -1.52
PTCD3-214ENST00000483925 SAFBQ15424 915 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTCD3-214ENST00000483925 PTPN21Q16825 1174 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 ANO1Q5XXA6 986 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 CEP128Q6ZU80 1094 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 BRAPQ7Z569 592 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 SLC7A14Q8TBB6 771 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 USP33Q8TEY7 942 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 TCTN2Q96GX1 697 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 MAP6Q96JE9 813 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 HERPUD2Q9BSE4 406 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 PAGR1Q9BTK6 254 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 FOXP3Q9BZS1 431 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 MTFR1LQ9H019 292 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 MBD1Q9UIS9 605 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-214ENST00000483925 TCFL5Q9UL49 500 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 PPP2R3BQ9Y5P8 575 aa5.55□□□□□ -1.52
PTCD3-214ENST00000483925 EXOC5O00471 708 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 NEMP1O14524 444 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 TRIM13O60858 407 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 EFEMP2O95967 443 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 JMJD7P0C870 316 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 PNLIPP16233 465 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 VCAM1P19320 739 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 PI3P19957 117 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 PMS1P54277 932 aaKnown RBP5.54□□□□□ -1.52
PTCD3-214ENST00000483925 NFIXQ14938 502 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 SEPT7Q16181 437 aaKnown RBP5.54□□□□□ -1.52
PTCD3-214ENST00000483925 ALFQ53S48 1182 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 EFCAB2Q5VUJ9 269 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 IQSEC1Q6DN90 963 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 ERAP2Q6P179 960 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms