RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 SMAD2Q15796 467 aaKnown RBP20.22■□□□□ 0.83
RXRB-203ENST00000481441 IFIH1Q9BYX4 1025 aaKnown RBP20.22■□□□□ 0.83
RXRB-203ENST00000481441 KAT14Q9H8E8 782 aa20.22■□□□□ 0.83
RXRB-203ENST00000481441 WDFY4Q6ZS81 3184 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 H3BRB1 525 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 SMIM10L2AP0DMW4 78 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 SMIM10L2BP0DMW5 78 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 CCDC178Q5BJE1 867 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 STOX1Q6ZVD7 989 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 VSIG10LQ86VR7 867 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 RNPEPQ9H4A4 650 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 TUT1Q9H6E5 874 aaKnown RBP20.21■□□□□ 0.83
RXRB-203ENST00000481441 VAT1LQ9HCJ6 419 aa20.21■□□□□ 0.83
RXRB-203ENST00000481441 DHX16O60231 1041 aaKnown RBP20.2■□□□□ 0.82
RXRB-203ENST00000481441 KDM4AO75164 1064 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 CTSHP09668 335 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 LINC00271P0C7V0 271 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 TGFB3P10600 412 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 NT5C2P49902 561 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 PDE1AP54750 535 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 DLX2Q07687 328 aaPredicted RBP20.2■□□□□ 0.82
RXRB-203ENST00000481441 PGM5Q15124 567 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 HERC4Q5GLZ8 1057 aaPredicted RBP20.2■□□□□ 0.82
RXRB-203ENST00000481441 IQCA1Q86XH1 822 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 IL31RAQ8NI17 732 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 GPKOWQ92917 476 aaPredicted RBP eCLIP20.2■□□□□ 0.82
RXRB-203ENST00000481441 MFSD14AQ96MC6 490 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 AMNQ9BXJ7 453 aa20.2■□□□□ 0.82
RXRB-203ENST00000481441 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
RXRB-203ENST00000481441 MBTPS2O43462 519 aa20.19■□□□□ 0.82
RXRB-203ENST00000481441 LGALS2P05162 132 aa20.19■□□□□ 0.82
RXRB-203ENST00000481441 PARP1P09874 1014 aaKnown RBP20.19■□□□□ 0.82
RXRB-203ENST00000481441 CTNNB1P35222 781 aa20.19■□□□□ 0.82
RXRB-203ENST00000481441 HYAL1Q12794 435 aa20.19■□□□□ 0.82
RXRB-203ENST00000481441 APBB2Q92870 758 aa20.19■□□□□ 0.82
RXRB-203ENST00000481441 IL17RAQ96F46 866 aa20.19■□□□□ 0.82
RXRB-203ENST00000481441 POP1Q99575 1024 aaKnown RBP20.19■□□□□ 0.82
RXRB-203ENST00000481441 LMAN2LQ9H0V9 348 aa20.19■□□□□ 0.82
RXRB-203ENST00000481441 MUTYHQ9UIF7 546 aa20.19■□□□□ 0.82
RXRB-203ENST00000481441 GRM6O15303 877 aa20.18■□□□□ 0.82
RXRB-203ENST00000481441 PPP1R11O60927 126 aaPredicted RBP20.18■□□□□ 0.82
RXRB-203ENST00000481441 RB1P06400 928 aa20.18■□□□□ 0.82
RXRB-203ENST00000481441 BMPR1AP36894 532 aa20.18■□□□□ 0.82
RXRB-203ENST00000481441 CLUL1Q15846 466 aa20.18■□□□□ 0.82
RXRB-203ENST00000481441 FIBCD1Q8N539 461 aa20.18■□□□□ 0.82
RXRB-203ENST00000481441 ENAHQ8N8S7 591 aaPredicted RBP20.18■□□□□ 0.82
RXRB-203ENST00000481441 ZFP91Q96JP5 570 aaPredicted RBP20.18■□□□□ 0.82
RXRB-203ENST00000481441 ZSCAN10Q96SZ4 725 aaPredicted RBP20.18■□□□□ 0.82
RXRB-203ENST00000481441 BCAS3Q9H6U6 928 aa20.18■□□□□ 0.82
RXRB-203ENST00000481441 MLXIPQ9HAP2 919 aa20.18■□□□□ 0.82
RXRB-203ENST00000481441 DOCK5Q9H7D0 1870 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 ZNF213O14771 459 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 HOXA13P31271 388 aaPredicted RBP20.17■□□□□ 0.82
RXRB-203ENST00000481441 FAM26DQ5JW98 314 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 ANKRD45Q5TZF3 282 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 RNF135Q8IUD6 432 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 SAMD3Q8N6K7 520 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 SNX27Q96L92 541 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 C11orf84Q9BUA3 381 aaPredicted RBP20.17■□□□□ 0.82
RXRB-203ENST00000481441 SETD4Q9NVD3 440 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 C5orf42Q9H799 3197 aa20.17■□□□□ 0.82
RXRB-203ENST00000481441 TBX10O75333 385 aa20.16■□□□□ 0.82
RXRB-203ENST00000481441 SMAD4Q13485 552 aaKnown RBP20.16■□□□□ 0.82
RXRB-203ENST00000481441 STAG2Q8N3U4 1231 aa20.16■□□□□ 0.82
RXRB-203ENST00000481441 MTMR8Q96EF0 704 aa20.16■□□□□ 0.82
RXRB-203ENST00000481441 PHOX2BQ99453 314 aa20.16■□□□□ 0.82
RXRB-203ENST00000481441 RC3H2Q9HBD1 1191 aaKnown RBP20.16■□□□□ 0.82
RXRB-203ENST00000481441 RWDD3Q9Y3V2 267 aa20.16■□□□□ 0.82
RXRB-203ENST00000481441 KAT6AQ92794 2004 aa20.16■□□□□ 0.82
RXRB-203ENST00000481441 TRIOO75962 3097 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 B4E1Z4 1266 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 CCND2P30279 289 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 GTF2F1P35269 517 aaKnown RBP eCLIP20.15■□□□□ 0.82
RXRB-203ENST00000481441 ADAM17P78536 824 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 PRSS33Q8NF86 280 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 EDAQ92838 391 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 CLP1Q92989 425 aaKnown RBP20.15■□□□□ 0.82
RXRB-203ENST00000481441 USP26Q9BXU7 913 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 ZSWIM5Q9P217 1185 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
RXRB-203ENST00000481441 PCDHA1Q9Y5I3 950 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 ADGRA3Q8IWK6 1321 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 TTC3P53804 2025 aa20.15■□□□□ 0.82
RXRB-203ENST00000481441 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.81
RXRB-203ENST00000481441 ZBTB5O15062 677 aa20.14■□□□□ 0.81
RXRB-203ENST00000481441 GNAT1P11488 350 aa20.14■□□□□ 0.81
RXRB-203ENST00000481441 BMP8AQ7Z5Y6 402 aa20.14■□□□□ 0.81
RXRB-203ENST00000481441 CD207Q9UJ71 328 aa20.14■□□□□ 0.81
RXRB-203ENST00000481441 KLRF2D3W0D1 207 aa20.13■□□□□ 0.81
RXRB-203ENST00000481441 STXBP3O00186 592 aa20.13■□□□□ 0.81
RXRB-203ENST00000481441 LINC01565O15544 149 aa20.13■□□□□ 0.81
RXRB-203ENST00000481441 MFAP1P55081 439 aaKnown RBP20.13■□□□□ 0.81
RXRB-203ENST00000481441 ADAM15Q13444 863 aa20.13■□□□□ 0.81
RXRB-203ENST00000481441 LMBR1Q8WVP7 490 aa20.13■□□□□ 0.81
RXRB-203ENST00000481441 GPR20Q99678 358 aa20.13■□□□□ 0.81
RXRB-203ENST00000481441 NOP56O00567 594 aaKnown RBP20.12■□□□□ 0.81
RXRB-203ENST00000481441 CHRNA1P02708 482 aa20.12■□□□□ 0.81
RXRB-203ENST00000481441 MMP1P03956 469 aa20.12■□□□□ 0.81
RXRB-203ENST00000481441 ICAM3P32942 547 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms