RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CCDC12Q8WUD4 166 aaPredicted RBP19.47■□□□□ 0.71
HSPG2-209ENST00000480900 CTAGE1Q96RT6 745 aa19.47■□□□□ 0.71
HSPG2-209ENST00000480900 ALG1Q9BT22 464 aa19.47■□□□□ 0.71
HSPG2-209ENST00000480900 RNF26Q9BY78 433 aaPredicted RBP19.47■□□□□ 0.71
HSPG2-209ENST00000480900 ANO3Q9BYT9 981 aa19.47■□□□□ 0.71
HSPG2-209ENST00000480900 UPF3BQ9BZI7 483 aaKnown RBP19.47■□□□□ 0.71
HSPG2-209ENST00000480900 MAFGO15525 162 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 EIF5BO60841 1220 aaKnown RBP19.46■□□□□ 0.71
HSPG2-209ENST00000480900 LGALS2P05162 132 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 PFKMP08237 780 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 CLK2P49760 499 aaKnown RBP19.46■□□□□ 0.71
HSPG2-209ENST00000480900 AKAP17AQ02040 695 aaKnown RBP19.46■□□□□ 0.71
HSPG2-209ENST00000480900 MTMR1Q13613 665 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 PKN1Q16512 942 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 Q7L0L9 218 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 CAGE1Q8TC20 777 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 HERVK_113Q902F9 699 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 ZNF274Q96GC6 653 aaPredicted RBP19.46■□□□□ 0.71
HSPG2-209ENST00000480900 SCLYQ96I15 445 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 GPR20Q99678 358 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 MTIF3Q9H2K0 278 aaKnown RBP19.46■□□□□ 0.71
HSPG2-209ENST00000480900 JADE2Q9NQC1 790 aa19.46■□□□□ 0.71
HSPG2-209ENST00000480900 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.45■□□□□ 0.7
HSPG2-209ENST00000480900 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.45■□□□□ 0.7
HSPG2-209ENST00000480900 H3BRB1 525 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 FGBP02675 491 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 KCNA2P16389 499 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 RFC2P35250 354 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 ANAPC15P60006 121 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 CCT2P78371 535 aaKnown RBP19.45■□□□□ 0.7
HSPG2-209ENST00000480900 RBL2Q08999 1139 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 RETREG2Q8NC44 543 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 PHKBQ93100 1093 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 ZMYND12Q9H0C1 365 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 TUT1Q9H6E5 874 aaKnown RBP19.45■□□□□ 0.7
HSPG2-209ENST00000480900 NCOA5Q9HCD5 579 aaKnown RBP19.45■□□□□ 0.7
HSPG2-209ENST00000480900 MTMR10Q9NXD2 777 aa19.45■□□□□ 0.7
HSPG2-209ENST00000480900 ATP9AO75110 1047 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 SREBF1P36956 1147 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 ZNF697Q5TEC3 545 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 MCTP2Q6DN12 878 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 VWCEQ96DN2 955 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 PGBD1Q96JS3 809 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 MXRA8Q9BRK3 442 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 C6orf50Q9HD87 102 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 PDRG1Q9NUG6 133 aa19.44■□□□□ 0.7
HSPG2-209ENST00000480900 MYH9P35579 1960 aaKnown RBP19.43■□□□□ 0.7
HSPG2-209ENST00000480900 IQCF3P0C7M6 154 aa19.43■□□□□ 0.7
HSPG2-209ENST00000480900 PTK7Q13308 1070 aa19.43■□□□□ 0.7
HSPG2-209ENST00000480900 CCDC148Q8NFR7 591 aa19.43■□□□□ 0.7
HSPG2-209ENST00000480900 AFAP1L1Q8TED9 768 aa19.43■□□□□ 0.7
HSPG2-209ENST00000480900 DHX38Q92620 1227 aaKnown RBP19.43■□□□□ 0.7
HSPG2-209ENST00000480900 SLC26A6Q9BXS9 759 aa19.43■□□□□ 0.7
HSPG2-209ENST00000480900 TMEM260Q9NX78 707 aa19.43■□□□□ 0.7
HSPG2-209ENST00000480900 ZNF215Q9UL58 517 aaPredicted RBP19.43■□□□□ 0.7
HSPG2-209ENST00000480900 WDR81Q562E7 1941 aa19.43■□□□□ 0.7
HSPG2-209ENST00000480900 COL6A3P12111 3177 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 TMEM265A0A087WTH1 108 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 GNA11P29992 359 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 HOXC8P31273 242 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 ARHGAP4P98171 946 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 SP4Q02446 784 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 CEP55Q53EZ4 464 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 TRIM22Q8IYM9 498 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 REXO1Q8N1G1 1221 aaKnown RBP19.42■□□□□ 0.7
HSPG2-209ENST00000480900 IL17RAQ96F46 866 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 KCNH7Q9NS40 1196 aa19.42■□□□□ 0.7
HSPG2-209ENST00000480900 CXXC1Q9P0U4 656 aaPredicted RBP19.42■□□□□ 0.7
HSPG2-209ENST00000480900 CPLX1O14810 134 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 PARNO95453 639 aaKnown RBP19.41■□□□□ 0.7
HSPG2-209ENST00000480900 SMIM10L2AP0DMW4 78 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 SMIM10L2BP0DMW5 78 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 SELPP16109 830 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 JAKMIP3Q5VZ66 844 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 NIPA1Q7RTP0 329 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 OTOP2Q7RTS6 562 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 DEFB128Q7Z7B8 93 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 TRIM50Q86XT4 487 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 BICD2Q8TD16 824 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 SEPT1Q8WYJ6 367 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 SH3GLB2Q9NR46 395 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 PKD2L1Q9P0L9 805 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 TELO2Q9Y4R8 837 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 NFASCO94856 1347 aa19.41■□□□□ 0.7
HSPG2-209ENST00000480900 C17orf102A2RUQ5 167 aa19.4■□□□□ 0.7
HSPG2-209ENST00000480900 MEIS1O00470 390 aa19.4■□□□□ 0.7
HSPG2-209ENST00000480900 PPFIA3O75145 1194 aa19.4■□□□□ 0.7
HSPG2-209ENST00000480900 DNAJB2P25686 324 aa19.4■□□□□ 0.7
HSPG2-209ENST00000480900 TCF7P36402 384 aaPredicted RBP19.4■□□□□ 0.7
HSPG2-209ENST00000480900 ZNF200P98182 395 aaPredicted RBP19.4■□□□□ 0.7
HSPG2-209ENST00000480900 SSRP1Q08945 709 aaKnown RBP19.4■□□□□ 0.7
HSPG2-209ENST00000480900 HIC1Q14526 733 aa19.4■□□□□ 0.7
HSPG2-209ENST00000480900 TRIM71Q2Q1W2 868 aaKnown RBP19.4■□□□□ 0.7
HSPG2-209ENST00000480900 UTP14CQ5TAP6 766 aaKnown RBP19.4■□□□□ 0.7
HSPG2-209ENST00000480900 CPLX2Q6PUV4 134 aaKnown RBP19.4■□□□□ 0.7
HSPG2-209ENST00000480900 SERINC5Q86VE9 423 aa19.4■□□□□ 0.7
HSPG2-209ENST00000480900 CYP2W1Q8TAV3 490 aa19.4■□□□□ 0.7
HSPG2-209ENST00000480900 CRYGNQ8WXF5 182 aa19.4■□□□□ 0.7
HSPG2-209ENST00000480900 LARP6Q9BRS8 491 aaKnown RBP19.4■□□□□ 0.7
HSPG2-209ENST00000480900 JPH1Q9HDC5 661 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms