RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 TM6SF1Q9BZW5 370 aa17.21■□□□□ 0.35
TDP2-205ENST00000480495 BCAS3Q9H6U6 928 aa17.21■□□□□ 0.35
TDP2-205ENST00000480495 ZSWIM6Q9HCJ5 1215 aa17.21■□□□□ 0.35
TDP2-205ENST00000480495 UBIAD1Q9Y5Z9 338 aa17.21■□□□□ 0.35
TDP2-205ENST00000480495 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.34
TDP2-205ENST00000480495 SMCO2A6NFE2 343 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 H3BRB1 525 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 PARNO95453 639 aaKnown RBP17.2■□□□□ 0.34
TDP2-205ENST00000480495 SCG2P13521 617 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 ITGB5P18084 799 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 DNAJB2P25686 324 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 EVCP57679 992 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 PTK7Q13308 1070 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 FAM161BQ96MY7 647 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 GUCD1Q96NT3 240 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 TUT1Q9H6E5 874 aaKnown RBP17.2■□□□□ 0.34
TDP2-205ENST00000480495 JADE2Q9NQC1 790 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 CYP46A1Q9Y6A2 500 aa17.2■□□□□ 0.34
TDP2-205ENST00000480495 PRPF3O43395 683 aaKnown RBP17.19■□□□□ 0.34
TDP2-205ENST00000480495 ACTN1P12814 892 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 SELPP16109 830 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 KCNA2P16389 499 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 AP3B2Q13367 1082 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 MTMR1Q13613 665 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 DEFB128Q7Z7B8 93 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
TDP2-205ENST00000480495 DHX38Q92620 1227 aaKnown RBP17.19■□□□□ 0.34
TDP2-205ENST00000480495 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
TDP2-205ENST00000480495 CXXC1Q9P0U4 656 aaPredicted RBP17.19■□□□□ 0.34
TDP2-205ENST00000480495 ZNF215Q9UL58 517 aaPredicted RBP17.19■□□□□ 0.34
TDP2-205ENST00000480495 SLC4A7Q9Y6M7 1214 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 MYH7BA7E2Y1 1941 aa17.19■□□□□ 0.34
TDP2-205ENST00000480495 ESYT2A0FGR8 921 aa17.18■□□□□ 0.34
TDP2-205ENST00000480495 PDIA3P30101 505 aaKnown RBP17.18■□□□□ 0.34
TDP2-205ENST00000480495 CLK2P49760 499 aaKnown RBP17.18■□□□□ 0.34
TDP2-205ENST00000480495 AKAP17AQ02040 695 aaKnown RBP17.18■□□□□ 0.34
TDP2-205ENST00000480495 RAB30Q15771 203 aa17.18■□□□□ 0.34
TDP2-205ENST00000480495 MCTP2Q6DN12 878 aa17.18■□□□□ 0.34
TDP2-205ENST00000480495 ANO3Q9BYT9 981 aa17.18■□□□□ 0.34
TDP2-205ENST00000480495 MSRAQ9UJ68 235 aa17.18■□□□□ 0.34
TDP2-205ENST00000480495 C17orf102A2RUQ5 167 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 ZBBXA8MT70 800 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 ATP9AO75110 1047 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 SMIM10L2AP0DMW4 78 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 SMIM10L2BP0DMW5 78 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 CKBP12277 381 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 IFNAR1P17181 557 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 HOXC8P31273 242 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 LRRC8DQ7L1W4 858 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 SEPT1Q8WYJ6 367 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 CDX2Q99626 313 aaPredicted RBP17.17■□□□□ 0.34
TDP2-205ENST00000480495 MXRA8Q9BRK3 442 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 RNF26Q9BY78 433 aaPredicted RBP17.17■□□□□ 0.34
TDP2-205ENST00000480495 PBX4Q9BYU1 374 aa17.17■□□□□ 0.34
TDP2-205ENST00000480495 FTOQ9C0B1 505 aaKnown RBP eCLIP17.17■□□□□ 0.34
TDP2-205ENST00000480495 GRXCR1A8MXD5 290 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 GNAT1P11488 350 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 SREBF1P36956 1147 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 ZNF200P98182 395 aaPredicted RBP17.16■□□□□ 0.34
TDP2-205ENST00000480495 SP4Q02446 784 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 TOB2Q14106 344 aaPredicted RBP17.16■□□□□ 0.34
TDP2-205ENST00000480495 NTRK3Q16288 839 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 PKN1Q16512 942 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 TRIM71Q2Q1W2 868 aaKnown RBP17.16■□□□□ 0.34
TDP2-205ENST00000480495 CEP55Q53EZ4 464 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 UTP14CQ5TAP6 766 aaKnown RBP17.16■□□□□ 0.34
TDP2-205ENST00000480495 SERINC5Q86VE9 423 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 ATP6V0A1Q93050 837 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 ZNF274Q96GC6 653 aaPredicted RBP17.16■□□□□ 0.34
TDP2-205ENST00000480495 ZMYND12Q9H0C1 365 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 C6orf50Q9HD87 102 aa17.16■□□□□ 0.34
TDP2-205ENST00000480495 EIF5BO60841 1220 aaKnown RBP17.15■□□□□ 0.34
TDP2-205ENST00000480495 BAIAP3O94812 1187 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 ATP2A2P16615 1042 aaKnown RBP17.15■□□□□ 0.34
TDP2-205ENST00000480495 GNA11P29992 359 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
TDP2-205ENST00000480495 PBX2P40425 430 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 CCT2P78371 535 aaKnown RBP17.15■□□□□ 0.34
TDP2-205ENST00000480495 HIC1Q14526 733 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 NIPA1Q7RTP0 329 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 PHKBQ93100 1093 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 RNPEPQ9H4A4 650 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 KCNH7Q9NS40 1196 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 TELO2Q9Y4R8 837 aa17.15■□□□□ 0.34
TDP2-205ENST00000480495 GSTTP1A0A1W2PQM5 241 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 CXCL10P02778 98 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 ARHGAP4P98171 946 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 JAKMIP3Q5VZ66 844 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 TRIM50Q86XT4 487 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 REXO1Q8N1G1 1221 aaKnown RBP17.14■□□□□ 0.33
TDP2-205ENST00000480495 CCDC148Q8NFR7 591 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 PHOSPHO2Q8TCD6 241 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 SLC9A7Q96T83 725 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 SLC26A6Q9BXS9 759 aa17.14■□□□□ 0.33
TDP2-205ENST00000480495 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms