RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 CXCL10P02778 98 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 CTSHP09668 335 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 SMIM10L2AP0DMW4 78 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 SMIM10L2BP0DMW5 78 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 TGFB3P10600 412 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 MCM5P33992 734 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 THPOP40225 353 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 SEMA3FQ13275 785 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 MBTPS1Q14703 1052 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 SKIV2LQ15477 1246 aaKnown RBP7.7□□□□□ -1.18
FN1-220ENST00000480024 ZNF618Q5T7W0 954 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 CREB3L3Q68CJ9 461 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 KRT40Q6A162 431 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 FAM117BQ6P1L5 589 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 TRAF7Q6Q0C0 670 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 METTL7BQ6UX53 244 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 CYFIP1Q7L576 1253 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 SERINC5Q86VE9 423 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 MICU3Q86XE3 530 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 SRBD1Q8N5C6 995 aaKnown RBP7.7□□□□□ -1.18
FN1-220ENST00000480024 IL27Q8NEV9 243 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 GDPD5Q8WTR4 605 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 ATXN2LQ8WWM7 1075 aaKnown RBP7.7□□□□□ -1.18
FN1-220ENST00000480024 CUL5Q93034 780 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 ATP6V0A1Q93050 837 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 ASB2Q96Q27 587 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 MAP3K14Q99558 947 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 ESYT1Q9BSJ8 1104 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 ZBED2Q9BTP6 218 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 TUT1Q9H6E5 874 aaKnown RBP7.7□□□□□ -1.18
FN1-220ENST00000480024 TELO2Q9Y4R8 837 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 SPATA31C2B4DYI2 1134 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 MEIS2O14770 477 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 TREHO43280 583 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 LGR5O75473 907 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 STAM2O75886 525 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 CALM1P0DP23 149 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 CALM2P0DP24 149 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 CALM3P0DP25 149 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 ICAM3P32942 547 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 MRPS5P82675 430 aaKnown RBP7.69□□□□□ -1.18
FN1-220ENST00000480024 TFF2Q03403 129 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 IKBKEQ14164 716 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 NEDD9Q14511 834 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 UBE2SQ16763 222 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 UTP14CQ5TAP6 766 aaKnown RBP7.69□□□□□ -1.18
FN1-220ENST00000480024 PCNX4Q63HM2 1172 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 TMTC3Q6ZXV5 915 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 HEATR3Q7Z4Q2 680 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 CCDC82Q8N4S0 544 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 ADAMTS19Q8TE59 1207 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 TMEM87BQ96K49 555 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 GPR20Q99678 358 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 LZTS2Q9BRK4 669 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 MTA3Q9BTC8 594 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 TSPYL2Q9H2G4 693 aaPredicted RBP7.69□□□□□ -1.18
FN1-220ENST00000480024 PKD2L1Q9P0L9 805 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 ZNF215Q9UL58 517 aaPredicted RBP7.69□□□□□ -1.18
FN1-220ENST00000480024 MTUS1Q9ULD2 1270 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 SLC12A7Q9Y666 1083 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 MTCH2Q9Y6C9 303 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 EMSYQ7Z589 1322 aa7.69□□□□□ -1.18
FN1-220ENST00000480024 MUC3AQ02505 3323 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 ABHD14A-ACY1A0A1B0GW23 586 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 RSPH10B2B2RC85 870 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 TNFRSF10AO00220 468 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 PIK3CDO00329 1044 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 EFCAB14O75071 495 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 GJB5O95377 273 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 RSPH10BP0C881 870 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 HOXC8P31273 242 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 LIFRP42702 1097 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 GNAQP50148 359 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 ARHGAP4P98171 946 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 GRB10Q13322 594 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 XRRA1Q6P2D8 792 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.68□□□□□ -1.184e-48■□□□□ 9.7
FN1-220ENST00000480024 NLRX1Q86UT6 975 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 MYOCDQ8IZQ8 938 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 TMTC2Q8N394 836 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 TCEANC2Q96MN5 208 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 UHRF1Q96T88 793 aaPredicted RBP7.68□□□□□ -1.18
FN1-220ENST00000480024 USP26Q9BXU7 913 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 RNPEPQ9H4A4 650 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 PSTPIP2Q9H939 334 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 SETD4Q9NVD3 440 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 NLRC5Q86WI3 1866 aa7.68□□□□□ -1.18
FN1-220ENST00000480024 LINC01553A4QN01 128 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 SPDYE3A6NKU9 549 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 LPXNO60711 386 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 AMHP03971 560 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 KCNA2P16389 499 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 ITGB5P18084 799 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 MARK3P27448 753 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 SMARCA1P28370 1054 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 TCF7P36402 384 aaPredicted RBP7.67□□□□□ -1.18
FN1-220ENST00000480024 KCNQ1P51787 676 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 MTMR1Q13613 665 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 NECTIN1Q15223 517 aa7.67□□□□□ -1.18
FN1-220ENST00000480024 BMP2KLQ5H9B9 411 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms