RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 UBE2SQ16763 222 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 ASTE1Q2TB18 679 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 CFAP58Q5T655 872 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 FAM114A1Q8IWE2 563 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 GDF3Q9NR23 364 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 BLOC1S4Q9NUP1 217 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 BTAF1O14981 1849 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 COL24A1Q17RW2 1714 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 MYMKA6NI61 221 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 PPP1R11O60927 126 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 TNFRSF8P28908 595 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 PRPHP41219 470 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 GSCP56915 257 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 HDLBPQ00341 1268 aaKnown RBP14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 DDR1Q08345 913 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 ECM1Q16610 540 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 CRY2Q49AN0 593 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 GALNT17Q6IS24 598 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 DPP8Q6V1X1 898 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 KDM7AQ6ZMT4 941 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 KRT25Q7Z3Z0 450 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 CASKIN2Q8WXE0 1202 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 RUBCNQ92622 972 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 PNMA5Q96PV4 448 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 C6orf50Q9HD87 102 aa14.68□□□□□ -0.06
PDZRN3-208ENST00000479530 CCDC88AQ3V6T2 1871 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 H0YHG0 523 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 SCNN1DP51172 638 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 HGSNATQ68CP4 663 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 CERS5Q8N5B7 392 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 ZNF473Q8WTR7 871 aaKnown RBP14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 KRT12Q99456 494 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 EPN3Q9H201 632 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 CD248Q9HCU0 757 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 NLRC4Q9NPP4 1024 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 SEC63Q9UGP8 760 aaKnown RBP14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 SBF2Q86WG5 1849 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 NR1D1P20393 614 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 LRRC41Q15345 812 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 SOGA3Q5TF21 947 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 CENPPQ6IPU0 288 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 TMED8Q6PL24 325 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 C15orf52Q6ZUT6 534 aaKnown RBP14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 B4GALNT4Q76KP1 1039 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 CCDC91Q7Z6B0 441 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 IFT20Q8IY31 132 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 REXO1Q8N1G1 1221 aaKnown RBP14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 PROCA1Q8NCQ7 364 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 C7orf25Q9BPX7 421 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 JPH2Q9BR39 696 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 MTMR4Q9NYA4 1195 aa14.67□□□□□ -0.06
PDZRN3-208ENST00000479530 MYH1P12882 1939 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 TOM1O60784 492 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 PALMO75781 387 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 KIAA0754O94854 1291 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 PTGISQ16647 500 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 CFAP221Q4G0U5 840 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 MTMR9Q96QG7 549 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 LZTS2Q9BRK4 669 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 PCDHAC2Q9Y5I4 1007 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 UBAP1LF5GYI3 381 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 PJA2O43164 708 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 TLR2O60603 784 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 PPP1R37O75864 691 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 FSBPO95073 299 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 ATP2B4P23634 1241 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 DOK7Q18PE1 504 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 RNF187Q5TA31 235 aaPredicted RBP14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 NOX5Q96PH1 765 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 CCT8L2Q96SF2 557 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 RIOX1Q9H6W3 641 aa14.66□□□□□ -0.06
PDZRN3-208ENST00000479530 DDX60LQ5H9U9 1706 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 SRCAPQ6ZRS2 3230 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 GNA11P29992 359 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 HPDP32754 393 aaPredicted RBP14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 TDRD12Q587J7 1177 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 ZFPM1Q8IX07 1006 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 OR2W6PQ8NHA6 318 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 MYCBPAPQ8TBZ2 947 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 CABS1Q96KC9 395 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 KANSL2Q9H9L4 492 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 KCNQ5Q9NR82 932 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 LAD1O00515 517 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 KCNMA1Q12791 1236 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 IFT88Q13099 833 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 CALCRLQ16602 461 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 KCNG1Q9UIX4 513 aa14.65□□□□□ -0.06
PDZRN3-208ENST00000479530 GAKO14976 1311 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 KLRC1P26715 233 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 TNNI2P48788 182 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 PTPROQ16827 1216 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 PDXDC1Q6P996 788 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 KCTD1Q719H9 257 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 NLRP14Q86W24 1093 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 FAM163AQ96GL9 167 aaPredicted RBP14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 PACSIN1Q9BY11 444 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 CENPHQ9H3R5 247 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms