RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SPTBN5Q9NRC6 3674 aaKnown RBP20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 NOP56O00567 594 aaKnown RBP20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 ATP9AO75110 1047 aa20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 CDC45O75419 566 aa20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 PFKMP08237 780 aa20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 RFC2P35250 354 aa20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 GNAQP50148 359 aa20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 TRAF7Q6Q0C0 670 aa20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 CCDC155Q8N6L0 562 aa20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 PCDHA11Q9Y5I1 949 aa20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 TCF20Q9UGU0 1960 aaKnown RBP20.01■□□□□ 0.79
ECHDC1-216ENST00000479525 LOXHD1Q8IVV2 1947 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 LCHNA4D1U4 455 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 SPATA31C2B4DYI2 1134 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 H3BRB1 525 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 TREHO43280 583 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 PPFIA4O75335 1185 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 CTSHP09668 335 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 SMIM10L2AP0DMW4 78 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 SMIM10L2BP0DMW5 78 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 WDR5P61964 334 aaKnown RBP20■□□□□ 0.79
ECHDC1-216ENST00000479525 GNPTABQ3T906 1256 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 WWC2Q6AWC2 1192 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 TYW1BQ6NUM6 668 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 APOA5Q6Q788 366 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 TMTC2Q8N394 836 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 GPR20Q99678 358 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 LZTS2Q9BRK4 669 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 MTA3Q9BTC8 594 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 TUT1Q9H6E5 874 aaKnown RBP20■□□□□ 0.79
ECHDC1-216ENST00000479525 PSTPIP2Q9H939 334 aa20■□□□□ 0.79
ECHDC1-216ENST00000479525 FIBPO43427 364 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 PPFIA3O75145 1194 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 CALM1P0DP23 149 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 CALM2P0DP24 149 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 CALM3P0DP25 149 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 TGFB3P10600 412 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 ICAM3P32942 547 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 THPOP40225 353 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 EXOSC10Q01780 885 aaKnown RBP19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 PTK7Q13308 1070 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 PCNX4Q63HM2 1172 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 HERC6Q8IVU3 1022 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 ATP6V0A1Q93050 837 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 RNPEPQ9H4A4 650 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 SETD4Q9NVD3 440 aa19.99■□□□□ 0.79
ECHDC1-216ENST00000479525 KLF18A0A0U1RQI7 1052 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 C17orf102A2RUQ5 167 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 KCNJ6P48051 423 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 RNF20Q5VTR2 975 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 SGMS1Q86VZ5 419 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 ARNTL2Q8WYA1 636 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 UIMC1Q96RL1 719 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 SLC9A7Q96T83 725 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 PCDHA6Q9UN73 950 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 PCDHA8Q9Y5H6 950 aa19.98■□□□□ 0.79
ECHDC1-216ENST00000479525 GOLGA8AA7E2F4 631 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 GOLGA8BA8MQT2 603 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 PIK3CDO00329 1044 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 ITGB5P18084 799 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 MARK3P27448 753 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 SMARCA1P28370 1054 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 CDC27P30260 824 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 NEDD9Q14511 834 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 RTN1Q16799 776 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 METTL7BQ6UX53 244 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 SYNE3Q6ZMZ3 975 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 ZBTB10Q96DT7 871 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 CCDC136Q96JN2 1154 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 TMEM260Q9NX78 707 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 TRANK1O15050 2925 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 PRRC2BQ5JSZ5 2229 aaKnown RBP19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 CUL9Q8IWT3 2517 aa19.97■□□□□ 0.79
ECHDC1-216ENST00000479525 ADAMTS3O15072 1205 aa19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 ZBTB43O43298 467 aa19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 TLL1O43897 1013 aa19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 TAP1Q03518 808 aa19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 APOBRQ0VD83 1088 aa19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 CNKSR3Q6P9H4 555 aa19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 DHX32Q7L7V1 743 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 MTUS1Q9ULD2 1270 aa19.96■□□□□ 0.79
ECHDC1-216ENST00000479525 CXCL10P02778 98 aa19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 KCNA2P16389 499 aa19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 NAPAP54920 295 aa19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 RBL2Q08999 1139 aa19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 NLRX1Q86UT6 975 aa19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 SERINC5Q86VE9 423 aa19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 CYP2W1Q8TAV3 490 aa19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 FAM217BQ9NTX9 383 aaPredicted RBP19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 V9GY48 417 aaPredicted RBP19.95■□□□□ 0.79
ECHDC1-216ENST00000479525 XIRP2A4UGR9 3374 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 SPDYE3A6NKU9 549 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 STAM2O75886 525 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 TCF7P36402 384 aaPredicted RBP19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 ARHGAP4P98171 946 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 FUT2Q10981 343 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 Q6ZUG5 572 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 POTEDQ86YR6 584 aa19.95■□□□□ 0.78
ECHDC1-216ENST00000479525 DBF4BQ8NFT6 615 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms