RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FIBCD1Q8N539 461 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 C16orf70Q9BSU1 422 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 AMNQ9BXJ7 453 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 MLXIPQ9HAP2 919 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.72■□□□□ 0.59
DDX56-210ENST00000479440 C5orf67F2Z3F1 127 aa18.72■□□□□ 0.59
DDX56-210ENST00000479440 H3BRB1 525 aa18.72■□□□□ 0.59
DDX56-210ENST00000479440 RGS20O76081 388 aa18.72■□□□□ 0.59
DDX56-210ENST00000479440 RB1P06400 928 aa18.72■□□□□ 0.59
DDX56-210ENST00000479440 HERC4Q5GLZ8 1057 aaPredicted RBP18.72■□□□□ 0.59
DDX56-210ENST00000479440 SAMD3Q8N6K7 520 aa18.72■□□□□ 0.59
DDX56-210ENST00000479440 IL17RAQ96F46 866 aa18.72■□□□□ 0.59
DDX56-210ENST00000479440 TUT1Q9H6E5 874 aaKnown RBP18.72■□□□□ 0.59
DDX56-210ENST00000479440 LAMA4Q16363 1823 aa18.72■□□□□ 0.59
DDX56-210ENST00000479440 ADGRA3Q8IWK6 1321 aa18.72■□□□□ 0.59
DDX56-210ENST00000479440 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 NOP56O00567 594 aaKnown RBP18.71■□□□□ 0.59
DDX56-210ENST00000479440 ZNF213O14771 459 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 TREHO43280 583 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 MBTPS2O43462 519 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 LGALS2P05162 132 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 CCND2P30279 289 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 NMIQ13287 307 aaPredicted RBP18.71■□□□□ 0.59
DDX56-210ENST00000479440 SMAD4Q13485 552 aaKnown RBP18.71■□□□□ 0.59
DDX56-210ENST00000479440 PGM5Q15124 567 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 CTC1Q2NKJ3 1217 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 JMJD4Q9H9V9 463 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 MUTYHQ9UIF7 546 aa18.71■□□□□ 0.59
DDX56-210ENST00000479440 KDM4AO75164 1064 aa18.7■□□□□ 0.58
DDX56-210ENST00000479440 CLUL1Q15846 466 aa18.7■□□□□ 0.58
DDX56-210ENST00000479440 STOX1Q6ZVD7 989 aa18.7■□□□□ 0.58
DDX56-210ENST00000479440 VSIG10LQ86VR7 867 aa18.7■□□□□ 0.58
DDX56-210ENST00000479440 SNX27Q96L92 541 aa18.7■□□□□ 0.58
DDX56-210ENST00000479440 ZSCAN10Q96SZ4 725 aaPredicted RBP18.7■□□□□ 0.58
DDX56-210ENST00000479440 VAT1LQ9HCJ6 419 aa18.7■□□□□ 0.58
DDX56-210ENST00000479440 ZNF215Q9UL58 517 aaPredicted RBP18.7■□□□□ 0.58
DDX56-210ENST00000479440 RBAK-RBAKDNI3L0D1 243 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 OPLAHO14841 1288 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 LTBRP36941 435 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 PDE1AP54750 535 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 PTPN5P54829 565 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 HYAL1Q12794 435 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 ANKS1AQ92625 1134 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 PPP2R3CQ969Q6 453 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 PRRX2Q99811 253 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 RNPEPQ9H4A4 650 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
DDX56-210ENST00000479440 STXBP3O00186 592 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 MMP1P03956 469 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 BMPR1AP36894 532 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 SP2Q02086 613 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 TRAF1Q13077 416 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 PKN1Q16512 942 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 GNPTABQ3T906 1256 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 ANKRD45Q5TZF3 282 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 RNF135Q8IUD6 432 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 ENAHQ8N8S7 591 aaPredicted RBP18.68■□□□□ 0.58
DDX56-210ENST00000479440 IL31RAQ8NI17 732 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 USP26Q9BXU7 913 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 CD207Q9UJ71 328 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 MYH6P13533 1939 aa18.68■□□□□ 0.58
DDX56-210ENST00000479440 MYH7BA7E2Y1 1941 aa18.67■□□□□ 0.58
DDX56-210ENST00000479440 TBX10O75333 385 aa18.67■□□□□ 0.58
DDX56-210ENST00000479440 NDUFV1P49821 464 aa18.67■□□□□ 0.58
DDX56-210ENST00000479440 FAM26DQ5JW98 314 aa18.67■□□□□ 0.58
DDX56-210ENST00000479440 EDAQ92838 391 aa18.67■□□□□ 0.58
DDX56-210ENST00000479440 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
DDX56-210ENST00000479440 PCDHA1Q9Y5I3 950 aa18.67■□□□□ 0.58
DDX56-210ENST00000479440 ATG2AQ2TAZ0 1938 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 B4E1Z4 1266 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 GCOM1H8Y6P7 765 aaPredicted RBP18.66■□□□□ 0.58
DDX56-210ENST00000479440 ZBTB5O15062 677 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 GRM6O15303 877 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 STAM2O75886 525 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 POLR2MP0CAP2 368 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 HOXA13P31271 388 aaPredicted RBP18.66■□□□□ 0.58
DDX56-210ENST00000479440 ARHGAP4P98171 946 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 DLX2Q07687 328 aaPredicted RBP18.66■□□□□ 0.58
DDX56-210ENST00000479440 NEDD9Q14511 834 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 METTL7BQ6UX53 244 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 BMP8AQ7Z5Y6 402 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
DDX56-210ENST00000479440 CLP1Q92989 425 aaKnown RBP18.66■□□□□ 0.58
DDX56-210ENST00000479440 PLVAPQ9BX97 442 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 SETD4Q9NVD3 440 aa18.66■□□□□ 0.58
DDX56-210ENST00000479440 LINC00271P0C7V0 271 aa18.65■□□□□ 0.58
DDX56-210ENST00000479440 BTG3Q14201 252 aaPredicted RBP18.65■□□□□ 0.58
DDX56-210ENST00000479440 IFIT1BQ5T764 474 aaKnown RBP18.65■□□□□ 0.58
DDX56-210ENST00000479440 PRSS33Q8NF86 280 aa18.65■□□□□ 0.58
DDX56-210ENST00000479440 GPKOWQ92917 476 aaPredicted RBP eCLIP18.65■□□□□ 0.585e-7■■■■■ 43.5
DDX56-210ENST00000479440 RILPL2Q969X0 211 aa18.65■□□□□ 0.58
DDX56-210ENST00000479440 MTMR8Q96EF0 704 aa18.65■□□□□ 0.58
DDX56-210ENST00000479440 OSBPL7Q9BZF2 842 aa18.65■□□□□ 0.58
DDX56-210ENST00000479440 RC3H2Q9HBD1 1191 aaKnown RBP18.65■□□□□ 0.58
DDX56-210ENST00000479440 KLRF2D3W0D1 207 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 PPP1R11O60927 126 aaPredicted RBP18.64■□□□□ 0.57
DDX56-210ENST00000479440 CSPG5O95196 566 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 GHRP10912 638 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 TAF2Q6P1X5 1199 aa18.64■□□□□ 0.57
DDX56-210ENST00000479440 RSPH3Q86UC2 560 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms