RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 BICD2Q8TD16 824 aa23.67■■□□□ 1.38
PKP4-209ENST00000479398 C16orf70Q9BSU1 422 aa23.67■■□□□ 1.38
PKP4-209ENST00000479398 HIPK3Q9H422 1215 aa23.67■■□□□ 1.38
PKP4-209ENST00000479398 ZNF286BP0CG31 522 aa23.66■■□□□ 1.38
PKP4-209ENST00000479398 KCNA2P16389 499 aa23.66■■□□□ 1.38
PKP4-209ENST00000479398 EPHB4P54760 987 aa23.66■■□□□ 1.38
PKP4-209ENST00000479398 MFSD10Q14728 455 aa23.66■■□□□ 1.38
PKP4-209ENST00000479398 KIAA0753Q2KHM9 967 aa23.66■■□□□ 1.38
PKP4-209ENST00000479398 LRIT3Q3SXY7 679 aa23.66■■□□□ 1.38
PKP4-209ENST00000479398 REXO1Q8N1G1 1221 aaKnown RBP23.66■■□□□ 1.38
PKP4-209ENST00000479398 GPR20Q99678 358 aa23.66■■□□□ 1.38
PKP4-209ENST00000479398 ALG1Q9BT22 464 aa23.66■■□□□ 1.38
PKP4-209ENST00000479398 NOC4LQ9BVI4 516 aaKnown RBP23.66■■□□□ 1.38
PKP4-209ENST00000479398 CDKL5O76039 1030 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 CYP2C9P11712 490 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 NLRP5P59047 1200 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 ARHGAP4P98171 946 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 CEP55Q53EZ4 464 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 C9orf50Q5SZB4 431 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 C7orf31Q8N865 590 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 KCNH7Q9NS40 1196 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 HDAC6Q9UBN7 1215 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 TELO2Q9Y4R8 837 aa23.65■■□□□ 1.38
PKP4-209ENST00000479398 UMODL1Q5DID0 1318 aa23.64■■□□□ 1.38
PKP4-209ENST00000479398 H3BRB1 525 aa23.64■■□□□ 1.37
PKP4-209ENST00000479398 MEIS1O00470 390 aa23.64■■□□□ 1.37
PKP4-209ENST00000479398 CYP3A4P08684 503 aa23.64■■□□□ 1.37
PKP4-209ENST00000479398 CSF2RAP15509 400 aa23.64■■□□□ 1.37
PKP4-209ENST00000479398 ZNF76P36508 570 aa23.64■■□□□ 1.37
PKP4-209ENST00000479398 PPIGQ13427 754 aaKnown RBP eCLIP23.64■■□□□ 1.37
PKP4-209ENST00000479398 PTGISQ16647 500 aa23.64■■□□□ 1.37
PKP4-209ENST00000479398 GDF6Q6KF10 455 aaPredicted RBP23.64■■□□□ 1.37
PKP4-209ENST00000479398 CRYGNQ8WXF5 182 aa23.64■■□□□ 1.37
PKP4-209ENST00000479398 TUT1Q9H6E5 874 aaKnown RBP23.64■■□□□ 1.37
PKP4-209ENST00000479398 SOX1O00570 391 aaPredicted RBP23.63■■□□□ 1.37
PKP4-209ENST00000479398 LGALS2P05162 132 aa23.63■■□□□ 1.37
PKP4-209ENST00000479398 ARP10275 920 aa23.63■■□□□ 1.37
PKP4-209ENST00000479398 ME3Q16798 604 aa23.63■■□□□ 1.37
PKP4-209ENST00000479398 PKD2L1Q9P0L9 805 aa23.63■■□□□ 1.37
PKP4-209ENST00000479398 GTF2IRD1Q9UHL9 959 aa23.63■■□□□ 1.37
PKP4-209ENST00000479398 CCL23P55773 120 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 SP4Q02446 784 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 C16orf59Q7L2K0 433 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 NIPA1Q7RTP0 329 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 FAM177A1Q8N128 213 aaPredicted RBP23.62■■□□□ 1.37
PKP4-209ENST00000479398 NECAB1Q8N987 351 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 RASGRP4Q8TDF6 673 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 SEPT1Q8WYJ6 367 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 AIFM3Q96NN9 605 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 NOD1Q9Y239 953 aa23.62■■□□□ 1.37
PKP4-209ENST00000479398 GSTTP1A0A1W2PQM5 241 aa23.61■■□□□ 1.37
PKP4-209ENST00000479398 CTDNEP1O95476 244 aa23.61■■□□□ 1.37
PKP4-209ENST00000479398 UTP14CQ5TAP6 766 aaKnown RBP23.61■■□□□ 1.37
PKP4-209ENST00000479398 LRCH3Q96II8 777 aa23.61■■□□□ 1.37
PKP4-209ENST00000479398 WNT8AQ9H1J5 351 aa23.61■■□□□ 1.37
PKP4-209ENST00000479398 AGO4Q9HCK5 861 aaKnown RBP23.61■■□□□ 1.37
PKP4-209ENST00000479398 PCDHA4Q9UN74 947 aa23.61■■□□□ 1.37
PKP4-209ENST00000479398 TRIP12Q14669 1992 aaPredicted RBP23.6■■□□□ 1.37
PKP4-209ENST00000479398 FAM86B1E9PN63 330 aa23.6■■□□□ 1.37
PKP4-209ENST00000479398 LARGE1O95461 756 aa23.6■■□□□ 1.37
PKP4-209ENST00000479398 FAM86B2P0C5J1 330 aa23.6■■□□□ 1.37
PKP4-209ENST00000479398 GALNT17Q6IS24 598 aa23.6■■□□□ 1.37
PKP4-209ENST00000479398 CTAGE1Q96RT6 745 aa23.6■■□□□ 1.37
PKP4-209ENST00000479398 KIF2CQ99661 725 aa23.6■■□□□ 1.37
PKP4-209ENST00000479398 C22orf23Q9BZE7 217 aa23.6■■□□□ 1.37
PKP4-209ENST00000479398 IL23AQ9NPF7 189 aa23.6■■□□□ 1.37
PKP4-209ENST00000479398 NFASCO94856 1347 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 STK36Q9NRP7 1315 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 DTNBO60941 627 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 ACRP10323 421 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 TCF7P36402 384 aaPredicted RBP23.59■■□□□ 1.37
PKP4-209ENST00000479398 BFSP2Q13515 415 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 TMEM240Q5SV17 173 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 PLA2G4DQ86XP0 818 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 BLIDQ8IZY5 108 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 RETREG2Q8NC44 543 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 GTF3C6Q969F1 213 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.59■■□□□ 1.377e-6■□□□□ 9.4
PKP4-209ENST00000479398 SDF4Q9BRK5 362 aa23.59■■□□□ 1.37
PKP4-209ENST00000479398 IGLV3-22A0A075B6J6 115 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 PITPNM1O00562 1244 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 SLC34A2O95436 690 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 CIITAP33076 1130 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 RBM25P49756 843 aaKnown RBP23.58■■□□□ 1.37
PKP4-209ENST00000479398 USP11P51784 963 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 HIC1Q14526 733 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 ZNF365Q70YC5 407 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 RPUSD2Q8IZ73 545 aaKnown RBP23.58■■□□□ 1.37
PKP4-209ENST00000479398 SCLYQ96I15 445 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 JPH1Q9HDC5 661 aaPredicted RBP23.58■■□□□ 1.37
PKP4-209ENST00000479398 ORC3Q9UBD5 711 aaPredicted RBP23.58■■□□□ 1.37
PKP4-209ENST00000479398 SLC9A2Q9UBY0 812 aa23.58■■□□□ 1.37
PKP4-209ENST00000479398 M0R2N6 131 aa23.57■■□□□ 1.36
PKP4-209ENST00000479398 EDIL3O43854 480 aa23.57■■□□□ 1.36
PKP4-209ENST00000479398 IQCF3P0C7M6 154 aa23.57■■□□□ 1.36
PKP4-209ENST00000479398 ZNF200P98182 395 aaPredicted RBP23.57■■□□□ 1.36
PKP4-209ENST00000479398 ITGB3BPQ13352 177 aaPredicted RBP23.57■■□□□ 1.36
PKP4-209ENST00000479398 NPY5RQ15761 445 aa23.57■■□□□ 1.36
PKP4-209ENST00000479398 TRIM50Q86XT4 487 aa23.57■■□□□ 1.36
PKP4-209ENST00000479398 DAGLBQ8NCG7 672 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms