RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 TECP42680 631 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 IRF5Q13568 498 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 KIF22Q14807 665 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 LY6KQ17RY6 165 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 TPRNQ4KMQ1 711 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 GJC2Q5T442 439 aaPredicted RBP14.8□□□□□ -0.04
CHD3-210ENST00000479080 DTHD1Q6ZMT9 781 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 OTOP1Q7RTM1 612 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 NLRX1Q86UT6 975 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 ZNF579Q8NAF0 562 aaKnown RBP14.8□□□□□ -0.04
CHD3-210ENST00000479080 RIT2Q99578 217 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 TTC12Q9H892 705 aaPredicted RBP14.8□□□□□ -0.04
CHD3-210ENST00000479080 DDX41Q9UJV9 622 aaKnown RBP14.8□□□□□ -0.04
CHD3-210ENST00000479080 KIAA1217Q5T5P2 1943 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 CASP8AP2Q9UKL3 1982 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 DDX39AO00148 427 aaKnown RBP14.79□□□□□ -0.04
CHD3-210ENST00000479080 NFASCO94856 1347 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 CYBAP13498 195 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 PFKFB1P16118 471 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 UBE2HP62256 183 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 PPP2R5CQ13362 524 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 ACVR2BQ13705 512 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 ECM1Q16610 540 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 GNPTABQ3T906 1256 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 LRCH2Q5VUJ6 765 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 ENGASEQ8NFI3 743 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 SYMPKQ92797 1274 aaKnown RBP14.79□□□□□ -0.04
CHD3-210ENST00000479080 LENG1Q96BZ8 264 aaPredicted RBP14.79□□□□□ -0.04
CHD3-210ENST00000479080 PNMA5Q96PV4 448 aa14.79□□□□□ -0.04
CHD3-210ENST00000479080 A0A1B0GVL5 298 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 MAFGO15525 162 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 FARP2O94887 1054 aaPredicted RBP14.78□□□□□ -0.04
CHD3-210ENST00000479080 HSPA1AP0DMV8 641 aaKnown RBP14.78□□□□□ -0.04
CHD3-210ENST00000479080 HSPA1BP0DMV9 641 aaKnown RBP14.78□□□□□ -0.04
CHD3-210ENST00000479080 SMPD1P17405 629 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 CMA1P23946 247 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 LONP1P36776 959 aaKnown RBP14.78□□□□□ -0.04
CHD3-210ENST00000479080 SLFN12Q8IYM2 578 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 FSIP1Q8NA03 581 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 BEGAINQ9BUH8 593 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 TEKT3Q9BXF9 490 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 ABHD16BQ9H3Z7 469 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 SLC5A4Q9NY91 659 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 ZHX1Q9UKY1 873 aaPredicted RBP14.78□□□□□ -0.04
CHD3-210ENST00000479080 PCDHA12Q9UN75 941 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 PTCH2Q9Y6C5 1203 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 DOCK5Q9H7D0 1870 aa14.78□□□□□ -0.04
CHD3-210ENST00000479080 B4DLN1 442 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 CHMP2AO43633 222 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 GAS7O60861 476 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 MED24O75448 989 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 NDUFA8P51970 172 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 IRX5P78411 483 aaPredicted RBP14.77□□□□□ -0.05
CHD3-210ENST00000479080 ARHGAP1Q07960 439 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 CACNB2Q08289 660 aaPredicted RBP14.77□□□□□ -0.05
CHD3-210ENST00000479080 GRB10Q13322 594 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 SNW1Q13573 536 aaKnown RBP14.77□□□□□ -0.05
CHD3-210ENST00000479080 CSPP1Q1MSJ5 1256 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 MAP3K21Q5TCX8 1036 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 NCAPH2Q6IBW4 605 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 SCFD2Q8WU76 684 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 MRPS27Q92552 414 aaKnown RBP14.77□□□□□ -0.05
CHD3-210ENST00000479080 CDHR1Q96JP9 859 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 MPHOSPH6Q99547 160 aaKnown RBP14.77□□□□□ -0.05
CHD3-210ENST00000479080 SENP7Q9BQF6 1050 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 WRAP73Q9P2S5 460 aaPredicted RBP14.77□□□□□ -0.05
CHD3-210ENST00000479080 LRWD1Q9UFC0 647 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 TRIM17Q9Y577 477 aa14.77□□□□□ -0.05
CHD3-210ENST00000479080 DDX11L8A8MPP1 907 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 ADCY3O60266 1144 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 GGPS1O95749 300 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 GNRH1P01148 92 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 SPATA31C1P0DKV0 1188 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 TXNP10599 105 aaKnown RBP14.76□□□□□ -0.05
CHD3-210ENST00000479080 PDIA5Q14554 519 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 KARSQ15046 597 aaKnown RBP14.76□□□□□ -0.05
CHD3-210ENST00000479080 E2F4Q16254 413 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 UGCGQ16739 394 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 CCDC144BQ3MJ40 725 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 TMEM119Q4V9L6 283 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 NAALADL2Q58DX5 795 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 CELF3Q5SZQ8 465 aaKnown RBP14.76□□□□□ -0.05
CHD3-210ENST00000479080 CYFIP1Q7L576 1253 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 KCNK18Q7Z418 384 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 FMR1NBQ8N0W7 255 aaPredicted RBP14.76□□□□□ -0.05
CHD3-210ENST00000479080 PCYT2Q99447 389 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 CCSER1Q9C0I3 900 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 TBC1D22BQ9NU19 505 aa14.76□□□□□ -0.05
CHD3-210ENST00000479080 GNEQ9Y223 722 aaKnown RBP14.76□□□□□ -0.05
CHD3-210ENST00000479080 GSTTP1A0A1W2PQM5 241 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 MARCH6O60337 910 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 NR1I2O75469 434 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 ATG7O95352 703 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 TGFB3P10600 412 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 HOXD10P28358 340 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 TMEM266Q2M3C6 531 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 HYIQ5T013 277 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 CABP7Q86V35 215 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 DYDC2Q96IM9 177 aa14.75□□□□□ -0.05
CHD3-210ENST00000479080 AK8Q96MA6 479 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms