RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 C5orf42Q9H799 3197 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 ZNF213O14771 459 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 CAND2O75155 1236 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 RB1P06400 928 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 CTSHP09668 335 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 PARP1P09874 1014 aaKnown RBP19.99■□□□□ 0.79
VIM-204ENST00000478746 SMIM10L2AP0DMW4 78 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 SMIM10L2BP0DMW5 78 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 NMIQ13287 307 aaPredicted RBP19.99■□□□□ 0.79
VIM-204ENST00000478746 SMAD2Q15796 467 aaKnown RBP19.99■□□□□ 0.79
VIM-204ENST00000478746 CLUL1Q15846 466 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 CTC1Q2NKJ3 1217 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 ANKRD45Q5TZF3 282 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 STOX1Q6ZVD7 989 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 ANKS1AQ92625 1134 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 POP1Q99575 1024 aaKnown RBP19.99■□□□□ 0.79
VIM-204ENST00000478746 AMNQ9BXJ7 453 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 MAP3K20Q9NYL2 800 aaKnown RBP19.99■□□□□ 0.79
VIM-204ENST00000478746 NEDD4P46934 1319 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 CCDC171Q6TFL3 1326 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 NLRC5Q86WI3 1866 aa19.99■□□□□ 0.79
VIM-204ENST00000478746 KDM4AO75164 1064 aa19.98■□□□□ 0.79
VIM-204ENST00000478746 HOXC8P31273 242 aa19.98■□□□□ 0.79
VIM-204ENST00000478746 CTNNB1P35222 781 aa19.98■□□□□ 0.79
VIM-204ENST00000478746 PDE1AP54750 535 aa19.98■□□□□ 0.79
VIM-204ENST00000478746 APBB2Q92870 758 aa19.98■□□□□ 0.79
VIM-204ENST00000478746 MUTYHQ9UIF7 546 aa19.98■□□□□ 0.79
VIM-204ENST00000478746 ZNF318Q5VUA4 2279 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 C5orf67F2Z3F1 127 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 OPLAHO14841 1288 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 MBTPS2O43462 519 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 GNAT1P11488 350 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 UBA1P22314 1058 aaKnown RBP19.97■□□□□ 0.79
VIM-204ENST00000478746 BMPR1AP36894 532 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 NT5C2P49902 561 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 MFAP1P55081 439 aaKnown RBP19.97■□□□□ 0.79
VIM-204ENST00000478746 HYAL1Q12794 435 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 PGM5Q15124 567 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 HERC4Q5GLZ8 1057 aaPredicted RBP19.97■□□□□ 0.79
VIM-204ENST00000478746 RNF135Q8IUD6 432 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 ZSCAN10Q96SZ4 725 aaPredicted RBP19.97■□□□□ 0.79
VIM-204ENST00000478746 C11orf84Q9BUA3 381 aaPredicted RBP19.97■□□□□ 0.79
VIM-204ENST00000478746 LMAN2LQ9H0V9 348 aa19.97■□□□□ 0.79
VIM-204ENST00000478746 LGALS2P05162 132 aa19.96■□□□□ 0.79
VIM-204ENST00000478746 CCND2P30279 289 aa19.96■□□□□ 0.79
VIM-204ENST00000478746 HOXA13P31271 388 aaPredicted RBP19.96■□□□□ 0.79
VIM-204ENST00000478746 GHRHRQ02643 423 aa19.96■□□□□ 0.79
VIM-204ENST00000478746 DLX2Q07687 328 aaPredicted RBP19.96■□□□□ 0.79
VIM-204ENST00000478746 SAMD3Q8N6K7 520 aa19.96■□□□□ 0.79
VIM-204ENST00000478746 GPKOWQ92917 476 aaPredicted RBP eCLIP19.96■□□□□ 0.79
VIM-204ENST00000478746 ZFP91Q96JP5 570 aaPredicted RBP19.96■□□□□ 0.79
VIM-204ENST00000478746 USP26Q9BXU7 913 aa19.96■□□□□ 0.79
VIM-204ENST00000478746 IGFLR1Q9H665 355 aa19.96■□□□□ 0.79
VIM-204ENST00000478746 SETD4Q9NVD3 440 aa19.96■□□□□ 0.79
VIM-204ENST00000478746 RALGAPA2Q2PPJ7 1873 aa19.96■□□□□ 0.79
VIM-204ENST00000478746 TRIM6-TRIM34B2RNG4 842 aa19.95■□□□□ 0.78
VIM-204ENST00000478746 NOP56O00567 594 aaKnown RBP19.95■□□□□ 0.78
VIM-204ENST00000478746 GRM6O15303 877 aa19.95■□□□□ 0.78
VIM-204ENST00000478746 ENAHQ8N8S7 591 aaPredicted RBP19.95■□□□□ 0.78
VIM-204ENST00000478746 IL31RAQ8NI17 732 aa19.95■□□□□ 0.78
VIM-204ENST00000478746 EDAQ92838 391 aa19.95■□□□□ 0.78
VIM-204ENST00000478746 BCAS3Q9H6U6 928 aa19.95■□□□□ 0.78
VIM-204ENST00000478746 ZSWIM5Q9P217 1185 aa19.95■□□□□ 0.78
VIM-204ENST00000478746 RWDD3Q9Y3V2 267 aa19.95■□□□□ 0.78
VIM-204ENST00000478746 PCDHA1Q9Y5I3 950 aa19.95■□□□□ 0.78
VIM-204ENST00000478746 COL4A6Q14031 1691 aa19.94■□□□□ 0.78
VIM-204ENST00000478746 B4E1Z4 1266 aa19.94■□□□□ 0.78
VIM-204ENST00000478746 STXBP3O00186 592 aa19.94■□□□□ 0.78
VIM-204ENST00000478746 SMAD4Q13485 552 aaKnown RBP19.94■□□□□ 0.78
VIM-204ENST00000478746 FAM26DQ5JW98 314 aa19.94■□□□□ 0.78
VIM-204ENST00000478746 STAG2Q8N3U4 1231 aa19.94■□□□□ 0.78
VIM-204ENST00000478746 FCHSD1Q86WN1 690 aa19.93■□□□□ 0.78
VIM-204ENST00000478746 RILPL2Q969X0 211 aa19.93■□□□□ 0.78
VIM-204ENST00000478746 SNX27Q96L92 541 aa19.93■□□□□ 0.78
VIM-204ENST00000478746 PHOX2BQ99453 314 aa19.93■□□□□ 0.78
VIM-204ENST00000478746 CD207Q9UJ71 328 aa19.93■□□□□ 0.78
VIM-204ENST00000478746 KLRF2D3W0D1 207 aa19.92■□□□□ 0.78
VIM-204ENST00000478746 GCOM1H8Y6P7 765 aaPredicted RBP19.92■□□□□ 0.78
VIM-204ENST00000478746 ZBTB5O15062 677 aa19.92■□□□□ 0.78
VIM-204ENST00000478746 PPP1R11O60927 126 aaPredicted RBP19.92■□□□□ 0.78
VIM-204ENST00000478746 LINC00271P0C7V0 271 aa19.92■□□□□ 0.78
VIM-204ENST00000478746 POLR2MP0CAP2 368 aa19.92■□□□□ 0.78
VIM-204ENST00000478746 GTF2F1P35269 517 aaKnown RBP eCLIP19.92■□□□□ 0.78
VIM-204ENST00000478746 ADAM15Q13444 863 aa19.92■□□□□ 0.78
VIM-204ENST00000478746 BMP8AQ7Z5Y6 402 aa19.92■□□□□ 0.78
VIM-204ENST00000478746 CLP1Q92989 425 aaKnown RBP19.92■□□□□ 0.78
VIM-204ENST00000478746 MTMR8Q96EF0 704 aa19.92■□□□□ 0.78
VIM-204ENST00000478746 TECTAO75443 2155 aa19.92■□□□□ 0.78
VIM-204ENST00000478746 LINC01565O15544 149 aa19.91■□□□□ 0.78
VIM-204ENST00000478746 TBX10O75333 385 aa19.91■□□□□ 0.78
VIM-204ENST00000478746 ARHGAP4P98171 946 aa19.91■□□□□ 0.78
VIM-204ENST00000478746 NEDD9Q14511 834 aa19.91■□□□□ 0.78
VIM-204ENST00000478746 GNPTABQ3T906 1256 aa19.91■□□□□ 0.78
VIM-204ENST00000478746 CYFIP1Q7L576 1253 aa19.91■□□□□ 0.78
VIM-204ENST00000478746 PBXIP1Q96AQ6 731 aa19.91■□□□□ 0.78
VIM-204ENST00000478746 ADGRA3Q8IWK6 1321 aa19.91■□□□□ 0.78
VIM-204ENST00000478746 ENPP3O14638 875 aa19.9■□□□□ 0.78
VIM-204ENST00000478746 CSPG5O95196 566 aa19.9■□□□□ 0.78
VIM-204ENST00000478746 CHRNA1P02708 482 aa19.9■□□□□ 0.78
VIM-204ENST00000478746 SDSP20132 328 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms