RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TMEM110-MUSTN1A8MSY1 372 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 STXBP3O00186 592 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 AURKAO14965 403 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 FGF10O15520 208 aaPredicted RBP4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 TSPAN6O43657 245 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 USP2O75604 605 aaPredicted RBP4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 KIF20AO95235 890 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 KCNH1O95259 989 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ITGAVP06756 1048 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 IFNGR1P15260 489 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 PAX7P23759 505 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 PIK3CAP42336 1068 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ERVFC1P60507 584 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 HMGN5P82970 282 aaKnown RBP4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 TMED1Q13445 227 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 SERINC3Q13530 473 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 MORC3Q14149 939 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 SEPT2Q15019 361 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 SLC14A2Q15849 920 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 KCNMB1Q16558 191 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 DPY19L1Q2PZI1 675 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 HYIQ5T013 277 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 EEF1DP3Q658K8 133 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 RCSD1Q6JBY9 416 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 CEP128Q6ZU80 1094 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ARHGEF25Q86VW2 580 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ZNF227Q86WZ6 799 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ZSWIM9Q86XI8 627 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 TRIM59Q8IWR1 403 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 IQCF2Q8IXL9 164 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 LILRA2Q8N149 483 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 NAT16Q8N8M0 369 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ABHD4Q8TB40 342 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ZBTB10Q96DT7 871 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ASIC4Q96FT7 647 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ZNF496Q96IT1 587 aaPredicted RBP4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 MRGPRX3Q96LB0 322 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 MAP3K14Q99558 947 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 PDGFDQ9GZP0 370 aaPredicted RBP4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 UTP6Q9NYH9 597 aaKnown RBP4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 EBF1Q9UH73 591 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 ISY1Q9ULR0 285 aaKnown RBP4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 GPR55Q9Y2T6 319 aaPredicted RBP4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 MSRB2Q9Y3D2 182 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 BACE2Q9Y5Z0 518 aa4.15□□□□□ -1.75
FNDC3B-209ENST00000478016 EIF4G3O43432 1585 aaKnown RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 IQCA1LA6NCM1 817 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 GOLGA6L3A6NEY3 463 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 C2orf71A6NGG8 1288 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 PES1O00541 588 aaKnown RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 KIF5CO60282 957 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 BBOX1O75936 387 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 KRT18P05783 430 aaKnown RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 MYL3P08590 195 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 TRHRP34981 398 aaPredicted RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 SEPHS1P49903 392 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 RTP1P59025 263 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 SNX17Q15036 470 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 BRD3Q15059 726 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 ALFQ53S48 1182 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 TMEM67Q5HYA8 995 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 CCDC158Q5M9N0 1113 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 FYB2Q5VWT5 728 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 HLA-DQA1Q5Y7H0 255 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 TSHZ3Q63HK5 1081 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 GTF2IRD2BQ6EKJ0 949 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 LRP10Q7Z4F1 713 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 GTF2IRD2Q86UP8 949 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 FERMT3Q86UX7 667 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 KSR1Q8IVT5 923 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 SUGP1Q8IWZ8 645 aaKnown RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 MYO1HQ8N1T3 1032 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 APPL2Q8NEU8 664 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 MYRIPQ8NFW9 859 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 FAM168AQ92567 244 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 TSR2Q969E8 191 aaKnown RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 ZNF669Q96BR6 464 aaPredicted RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 MRFAP1L1Q96HT8 127 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 PTCHD1Q96NR3 888 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 IWS1Q96ST2 819 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 SLX1AQ9BQ83 275 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 MCMBPQ9BTE3 642 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 LGR4Q9BXB1 951 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 CCDC113Q9H0I3 377 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 C19orf44Q9H6X5 657 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 SP110Q9HB58 689 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 DCAF16Q9NXF7 216 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 XPO7Q9UIA9 1087 aaKnown RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 FBXO2Q9UK22 296 aaPredicted RBP4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 RABGAP1Q9Y3P9 1069 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 CEP83Q9Y592 693 aa4.14□□□□□ -1.75
FNDC3B-209ENST00000478016 A0A1W2PQ45 241 aaPredicted RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 A0A1W2PQY0 241 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 WTIPA6NIX2 430 aaPredicted RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 CCDC85CA6NKD9 419 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 FADS2P1A8MWK0 482 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 PDPK1O15530 556 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 DIAPH1O60610 1272 aaKnown RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 BAIAP3O94812 1187 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 TBC1D8O95759 1140 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms