RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GPR20Q99678 358 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 GJB4Q9NTQ9 266 aa20.2■□□□□ 0.82
PTPN7-209ENST00000477554 CTDNEP1O95476 244 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 F2P00734 622 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 TGFB3P10600 412 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 ST3GAL1Q11201 340 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 MFSD10Q14728 455 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 KIAA0753Q2KHM9 967 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 FAM109BQ6ICB4 259 aaPredicted RBP20.19■□□□□ 0.82
PTPN7-209ENST00000477554 NFRKBQ6P4R8 1299 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 Q7L0L9 218 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.19■□□□□ 0.82
PTPN7-209ENST00000477554 RNF26Q9BY78 433 aaPredicted RBP20.19■□□□□ 0.82
PTPN7-209ENST00000477554 ZMYND12Q9H0C1 365 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 hCG_1984214I3L0E3 225 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 KPNA6O60684 536 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 LGALS2P05162 132 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 RABEP1Q15276 862 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 NPY5RQ15761 445 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 GNPTABQ3T906 1256 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 KCNV1Q6PIU1 500 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 ZNF713Q8N859 430 aaPredicted RBP20.19■□□□□ 0.82
PTPN7-209ENST00000477554 CRYGNQ8WXF5 182 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 KIF2CQ99661 725 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 JADE2Q9NQC1 790 aa20.19■□□□□ 0.82
PTPN7-209ENST00000477554 FAM86B1E9PN63 330 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 STAM2O75886 525 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 FAM86B2P0C5J1 330 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 SREBF1P36956 1147 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 ITGB3BPQ13352 177 aaPredicted RBP20.18■□□□□ 0.82
PTPN7-209ENST00000477554 MTMR1Q13613 665 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 ME3Q16798 604 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 LRIT3Q3SXY7 679 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 XRRA1Q6P2D8 792 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 METTL7BQ6UX53 244 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 GPRASP2Q96D09 838 aa20.18■□□□□ 0.82
PTPN7-209ENST00000477554 COL6A3P12111 3177 aa20.17■□□□□ 0.82
PTPN7-209ENST00000477554 ESYT2A0FGR8 921 aa20.17■□□□□ 0.82
PTPN7-209ENST00000477554 PFKFB2O60825 505 aa20.17■□□□□ 0.82
PTPN7-209ENST00000477554 SSRP1Q08945 709 aaKnown RBP20.17■□□□□ 0.82
PTPN7-209ENST00000477554 TMEM240Q5SV17 173 aa20.17■□□□□ 0.82
PTPN7-209ENST00000477554 UTP14CQ5TAP6 766 aaKnown RBP20.17■□□□□ 0.82
PTPN7-209ENST00000477554 NLRX1Q86UT6 975 aa20.17■□□□□ 0.82
PTPN7-209ENST00000477554 MXRA8Q9BRK3 442 aa20.17■□□□□ 0.82
PTPN7-209ENST00000477554 KCNH7Q9NS40 1196 aa20.17■□□□□ 0.82
PTPN7-209ENST00000477554 EYSQ5T1H1 3165 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 GSTTP1A0A1W2PQM5 241 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 PPFIA4O75335 1185 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 NEK4P51957 841 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 ARHGAP4P98171 946 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 NEDD9Q14511 834 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 PTGISQ16647 500 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 TET1Q8NFU7 2136 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 CXXC1Q9P0U4 656 aaPredicted RBP20.16■□□□□ 0.82
PTPN7-209ENST00000477554 GTF2IRD1Q9UHL9 959 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 TANC1Q9C0D5 1861 aa20.16■□□□□ 0.82
PTPN7-209ENST00000477554 AKAP17AQ02040 695 aaKnown RBP20.15■□□□□ 0.82
PTPN7-209ENST00000477554 GPNMBQ14956 572 aa20.15■□□□□ 0.82
PTPN7-209ENST00000477554 ZNF365Q70YC5 407 aa20.15■□□□□ 0.82
PTPN7-209ENST00000477554 SESTD1Q86VW0 696 aa20.15■□□□□ 0.82
PTPN7-209ENST00000477554 SENP7Q9BQF6 1050 aa20.15■□□□□ 0.82
PTPN7-209ENST00000477554 KCNJ14Q9UNX9 436 aa20.15■□□□□ 0.82
PTPN7-209ENST00000477554 IGLV3-22A0A075B6J6 115 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 GRXCR1A8MXD5 290 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 H3BRB1 525 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 NOP56O00567 594 aaKnown RBP20.14■□□□□ 0.81
PTPN7-209ENST00000477554 CPLX1O14810 134 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 AP3B2Q13367 1082 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 TCTN1Q2MV58 587 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 CEP55Q53EZ4 464 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 REXO1Q8N1G1 1221 aaKnown RBP20.14■□□□□ 0.81
PTPN7-209ENST00000477554 GJA10Q969M2 543 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 ZBTB10Q96DT7 871 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 RNPC3Q96LT9 517 aaKnown RBP20.14■□□□□ 0.81
PTPN7-209ENST00000477554 PCYT2Q99447 389 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 OSBPL7Q9BZF2 842 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 SLKQ9H2G2 1235 aaPredicted RBP20.14■□□□□ 0.81
PTPN7-209ENST00000477554 RNPEPQ9H4A4 650 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 TUT1Q9H6E5 874 aaKnown RBP20.14■□□□□ 0.81
PTPN7-209ENST00000477554 AGO4Q9HCK5 861 aaKnown RBP20.14■□□□□ 0.81
PTPN7-209ENST00000477554 C6orf50Q9HD87 102 aa20.14■□□□□ 0.81
PTPN7-209ENST00000477554 M0R2N6 131 aa20.13■□□□□ 0.81
PTPN7-209ENST00000477554 MEIS1O00470 390 aa20.13■□□□□ 0.81
PTPN7-209ENST00000477554 FOSP01100 380 aaPredicted RBP20.13■□□□□ 0.81
PTPN7-209ENST00000477554 SMIM10L2AP0DMW4 78 aa20.13■□□□□ 0.81
PTPN7-209ENST00000477554 SMIM10L2BP0DMW5 78 aa20.13■□□□□ 0.81
PTPN7-209ENST00000477554 FDPSP14324 419 aaKnown RBP20.13■□□□□ 0.81
PTPN7-209ENST00000477554 TCF7P36402 384 aaPredicted RBP20.13■□□□□ 0.81
PTPN7-209ENST00000477554 DEFB128Q7Z7B8 93 aa20.13■□□□□ 0.81
PTPN7-209ENST00000477554 TMEM199Q8N511 208 aa20.13■□□□□ 0.81
PTPN7-209ENST00000477554 C7orf31Q8N865 590 aa20.13■□□□□ 0.81
PTPN7-209ENST00000477554 CHD9Q3L8U1 2897 aa20.13■□□□□ 0.81
PTPN7-209ENST00000477554 DDX39AO00148 427 aaKnown RBP20.12■□□□□ 0.81
PTPN7-209ENST00000477554 ST18O60284 1047 aa20.12■□□□□ 0.81
PTPN7-209ENST00000477554 JAK2O60674 1132 aa20.12■□□□□ 0.81
PTPN7-209ENST00000477554 CCNE2O96020 404 aa20.12■□□□□ 0.81
PTPN7-209ENST00000477554 MARK3P27448 753 aa20.12■□□□□ 0.81
PTPN7-209ENST00000477554 NLRP5P59047 1200 aa20.12■□□□□ 0.81
PTPN7-209ENST00000477554 PTPN11Q06124 597 aaPredicted RBP20.12■□□□□ 0.81
PTPN7-209ENST00000477554 TRIM71Q2Q1W2 868 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms