RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 NSUN3Q9H649 340 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 IGFLR1Q9H665 355 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 JMJD4Q9H9V9 463 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 PLXNA4Q9HCM2 1894 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 SALL3Q9BXA9 1300 aa7.76□□□□□ -1.17
RTFDC1-206ENST00000477485 MYO7AQ13402 2215 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 H3BNC9 293 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 H3BRB1 525 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 HAS3O00219 553 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 PPFIA4O75335 1185 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 LGALS2P05162 132 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 SMIM10L2AP0DMW4 78 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 SMIM10L2BP0DMW5 78 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 SDSP20132 328 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 IBSPP21815 317 aaPredicted RBP7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 MRE11P49959 708 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 ARHGAP4P98171 946 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 HIC1Q14526 733 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 IMMTQ16891 758 aaKnown RBP7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 PLEKHG4Q58EX7 1191 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 CELF3Q5SZQ8 465 aaKnown RBP7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 MYSM1Q5VVJ2 828 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 TRAF7Q6Q0C0 670 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 RPAINQ86UA6 219 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 SERINC5Q86VE9 423 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 STAG2Q8N3U4 1231 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 FIBCD1Q8N539 461 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 IL31RAQ8NI17 732 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 PIBF1Q8WXW3 757 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 GPKOWQ92917 476 aaPredicted RBP eCLIP7.75□□□□□ -1.178e-6■■□□□ 13.6
RTFDC1-206ENST00000477485 PABPC5Q96DU9 382 aaKnown RBP7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 PDCD2LQ9BRP1 358 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 TUT1Q9H6E5 874 aaKnown RBP7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 PCDHA1Q9Y5I3 950 aa7.75□□□□□ -1.17
RTFDC1-206ENST00000477485 SPDYE4A6NLX3 237 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 KLRF2D3W0D1 207 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 GCOM1H8Y6P7 765 aaPredicted RBP7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 RGS20O76081 388 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 POLR2MP0CAP2 368 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 GNAT1P11488 350 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 HSD17B4P51659 736 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 HTRA4P83105 476 aaPredicted RBP7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 SP2Q02086 613 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 GNPTABQ3T906 1256 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 TRIM50Q86XT4 487 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 NEK9Q8TD19 979 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 SP7Q8TDD2 431 aaPredicted RBP7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 TOP1MTQ969P6 601 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 IL17RAQ96F46 866 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 C16orf70Q9BSU1 422 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 UPF3BQ9BZI7 483 aaKnown RBP7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 KRT23Q9C075 422 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 MAF1Q9H063 256 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 RNPEPQ9H4A4 650 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 SETD4Q9NVD3 440 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 ZSWIM5Q9P217 1185 aa7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 ZNF215Q9UL58 517 aaPredicted RBP7.74□□□□□ -1.17
RTFDC1-206ENST00000477485 KMT2EQ8IZD2 1858 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 OPLAHO14841 1288 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 ZBTB5O15062 677 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 PPP1R11O60927 126 aaPredicted RBP7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 GHRP10912 638 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 NDUFV1P49821 464 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 NHLH1Q02575 133 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 ZP2Q05996 745 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 BTG3Q14201 252 aaPredicted RBP7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 VSIG10LQ86VR7 867 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 ADHFE1Q8IWW8 467 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 APBB2Q92870 758 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 FBXL18Q96ME1 805 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 PIGSQ96S52 555 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 POP1Q99575 1024 aaKnown RBP7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 C11orf84Q9BUA3 381 aaPredicted RBP7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 OSBPL7Q9BZF2 842 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 BCAS3Q9H6U6 928 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 CNNM2Q9H8M5 875 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 RTEL1Q9NZ71 1219 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 PRKAG3Q9UGI9 489 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 MUTYHQ9UIF7 546 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 ADGRA3Q8IWK6 1321 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 COL4A6Q14031 1691 aa7.73□□□□□ -1.17
RTFDC1-206ENST00000477485 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 ERICH2A1L162 156 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 STXBP3O00186 592 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 GRM6O15303 877 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 TGFB3P10600 412 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 HOXD8P13378 290 aaPredicted RBP7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 MARK3P27448 753 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 GTF2F1P35269 517 aaKnown RBP eCLIP7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 IRS1P35568 1242 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 RRP1P56182 461 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 IGBP1P78318 339 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 TRDNQ13061 729 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 TRAF1Q13077 416 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 NEDD9Q14511 834 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 PAN2Q504Q3 1202 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 STOX1Q6ZVD7 989 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 HFE2Q6ZVN8 426 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms