RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	TSR2	Q969E8	191 aa	Known RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF552	Q9H707	407 aa	Predicted RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	BRMS1	Q9HCU9	246 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	HYPK	Q9NX55	129 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	RTEL1	Q9NZ71	1219 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	GPR160	Q9UJ42	338 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CNOT6	Q9ULM6	557 aa	Known RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	RGPD3	A6NKT7	1758 aa	Predicted RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	RGPD4	Q7Z3J3	1758 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	DLG5	Q8TDM6	1919 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TNS1	Q9HBL0	1735 aa	Known RBP	5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	KCNQ3	O43525	872 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	PEX10	O60683	326 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SEMA7A	O75326	666 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ATE1	O95260	518 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF853	P0CG23	659 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CYP19A1	P11511	503 aa	Predicted RBP	5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	MYL6B	P14649	208 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	EXOSC9	Q06265	439 aa	Known RBP	5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	NEXN	Q0ZGT2	675 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	DUSP4	Q13115	394 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ITPK1	Q13572	414 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SNW1	Q13573	536 aa	Known RBP	5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SNX17	Q15036	470 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CWF19L2	Q2TBE0	894 aa	Known RBP	5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SKOR2	Q2VWA4	1001 aa	Predicted RBP	5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	HSP90AB3P	Q58FF7	597 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TMC3	Q7Z5M5	1100 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	PRRT2	Q7Z6L0	340 aa	Predicted RBP	5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	NLGN1	Q8N2Q7	840 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	LINC00116	Q8NCU8	138 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CXorf38	Q8TB03	319 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	GCM1	Q9NP62	436 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	PCDHB14	Q9Y5E9	798 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	USP16	Q9Y5T5	823 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	FANCI	Q9NVI1	1328 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ADAMTS7	Q9UKP4	1686 aa		5.69	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TOGARAM1	Q9Y4F4	1720 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TMEM82	A0PJX8	343 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	A1BG	P04217	495 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	HSP90B1	P14625	803 aa	Known RBP	5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	POLR2B	P30876	1174 aa	Known RBP	5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	EIF4A3	P38919	411 aa	Known RBP	5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SLFN5	Q08AF3	891 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	AIMP1	Q12904	312 aa	Known RBP	5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	NBPF9	Q3BBW0	867 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF385B	Q569K4	471 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	OVOS1	Q6IE37	1185 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	RNF111	Q6ZNA4	994 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	NLRX1	Q86UT6	975 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	DAGLB	Q8NCG7	672 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TCTN2	Q96GX1	697 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	FOXP3	Q9BZS1	431 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	MTFR1L	Q9H019	292 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SPON1	Q9HCB6	807 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	GMIP	Q9P107	970 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZBTB1	Q9Y2K1	713 aa		5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	VIRMA	Q69YN4	1812 aa	Known RBP	5.68	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	COL15A1	P39059	1388 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TEX51	A0A1B0GUA7	166 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	IPO8	O15397	1037 aa	Known RBP	5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	USP2	O75604	605 aa	Predicted RBP	5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	RAG1	P15918	1043 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ERCC3	P19447	782 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	RPL10	P27635	214 aa	Known RBP	5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	RNF4	P78317	190 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	NFKB2	Q00653	900 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF827	Q17R98	1081 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ALDH1L2	Q3SY69	923 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CDCP2	Q5VXM1	449 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	C8orf58	Q8NAV2	365 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF296	Q8WUU4	475 aa	Predicted RBP	5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SGPP1	Q9BX95	441 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	KRTAP9-8	Q9BYQ0	159 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	XYLT2	Q9H1B5	865 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CNNM2	Q9H8M5	875 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	EHMT1	Q9H9B1	1298 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SMC4	Q9NTJ3	1288 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ADAMTS1	Q9UHI8	967 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	NARF	Q9UHQ1	456 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	KCTD3	Q9Y597	815 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	LY75	O60449	1722 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	KCP	Q6ZWJ8	1503 aa		5.67	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF831	Q5JPB2	1677 aa		5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	C4B	P0C0L5	1744 aa		5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ERVV-1	B6SEH8	477 aa		5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	PDE6B	P35913	854 aa		5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	EIF5	P55010	431 aa	Known RBP	5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CLC	Q05315	142 aa		5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	BBS9	Q3SYG4	887 aa		5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CLEC4G	Q6UXB4	293 aa		5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZPBP2	Q6X784	338 aa		5.66	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	COPS6	Q7L5N1	327 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms