RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
BRCA1-213ENST00000476777 A0A0D9SFI3 127 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 C17orf102A2RUQ5 167 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 C5orf67F2Z3F1 127 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 OPLAHO14841 1288 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 LINC00271P0C7V0 271 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
BRCA1-213ENST00000476777 SP2Q02086 613 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 DLX2Q07687 328 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-213ENST00000476777 MCMDC2Q4G0Z9 681 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 DGKHQ86XP1 1220 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 ZKSCAN3Q9BRR0 538 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 IFIH1Q9BYX4 1025 aaKnown RBP13.27□□□□□ -0.29
BRCA1-213ENST00000476777 RALGAPA2Q2PPJ7 1873 aa13.27□□□□□ -0.29
BRCA1-213ENST00000476777 VPS13AQ96RL7 3174 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 TREHO43280 583 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 MBTPS2O43462 519 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 CAND2O75155 1236 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 GGPS1O95749 300 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 CFBP00751 764 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 SMIM10L2AP0DMW4 78 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 SMIM10L2BP0DMW5 78 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 UBA1P22314 1058 aaKnown RBP13.26□□□□□ -0.29
BRCA1-213ENST00000476777 HSD17B4P51659 736 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 GHRHRQ02643 423 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 HYAL1Q12794 435 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 CLUL1Q15846 466 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 KCNV1Q6PIU1 500 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 ZNF589Q86UQ0 364 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-213ENST00000476777 VSIG10LQ86VR7 867 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 RNF135Q8IUD6 432 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 PNMA1Q8ND90 353 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 POP1Q99575 1024 aaKnown RBP13.26□□□□□ -0.29
BRCA1-213ENST00000476777 PDCD2LQ9BRP1 358 aa13.26□□□□□ -0.29
BRCA1-213ENST00000476777 NEDD4P46934 1319 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 H3BRB1 525 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 GRM6O15303 877 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 RB1P06400 928 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 CTSHP09668 335 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 MYCLP12524 364 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-213ENST00000476777 CTNNB1P35222 781 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 BMPR1AP36894 532 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 STOX1Q6ZVD7 989 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 PRSS33Q8NF86 280 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 ESR2Q92731 530 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 EDAQ92838 391 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 LMAN2LQ9H0V9 348 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 RNPEPQ9H4A4 650 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 TUT1Q9H6E5 874 aaKnown RBP13.25□□□□□ -0.29
BRCA1-213ENST00000476777 JMJD4Q9H9V9 463 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 PCDHB15Q9Y5E8 787 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 BAZ2BQ9UIF8 2168 aaKnown RBP13.25□□□□□ -0.29
BRCA1-213ENST00000476777 TTC3P53804 2025 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 MYO15AQ9UKN7 3530 aa13.25□□□□□ -0.29
BRCA1-213ENST00000476777 GVINP1Q7Z2Y8 2422 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 TBX10O75333 385 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 LGALS2P05162 132 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 TGFB3P10600 412 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.294e-8■■■□□ 16.5
BRCA1-213ENST00000476777 SMAD4Q13485 552 aaKnown RBP13.24□□□□□ -0.29
BRCA1-213ENST00000476777 ASPRV1Q53RT3 343 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 IER5LQ5T953 404 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 BMP8AQ7Z5Y6 402 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 FIBCD1Q8N539 461 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 IL31RAQ8NI17 732 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 APBB2Q92870 758 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
BRCA1-213ENST00000476777 C11orf84Q9BUA3 381 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-213ENST00000476777 RNF41Q9H4P4 317 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-213ENST00000476777 BCAS3Q9H6U6 928 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
BRCA1-213ENST00000476777 KAT6AQ92794 2004 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 CACNA1AO00555 2505 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 STXBP3O00186 592 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 DHX16O60231 1041 aaKnown RBP13.23□□□□□ -0.29
BRCA1-213ENST00000476777 PARP1P09874 1014 aaKnown RBP13.23□□□□□ -0.29
BRCA1-213ENST00000476777 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 PGM5Q15124 567 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 CCDC178Q5BJE1 867 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 FAM26DQ5JW98 314 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 CLP1Q92989 425 aaKnown RBP13.23□□□□□ -0.29
BRCA1-213ENST00000476777 AMNQ9BXJ7 453 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 RC3H2Q9HBD1 1191 aaKnown RBP13.23□□□□□ -0.29
BRCA1-213ENST00000476777 SETD4Q9NVD3 440 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 MAP3K20Q9NYL2 800 aaKnown RBP13.23□□□□□ -0.29
BRCA1-213ENST00000476777 CD207Q9UJ71 328 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 RWDD3Q9Y3V2 267 aa13.23□□□□□ -0.29
BRCA1-213ENST00000476777 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 TMEM221A6NGB7 291 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 M0R296 226 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 LINC01565O15544 149 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-213ENST00000476777 KDM4AO75164 1064 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 HOXA13P31271 388 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-213ENST00000476777 PTPN5P54829 565 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 ADAM17P78536 824 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms