RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 C17orf102A2RUQ5 167 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 H3BRB1 525 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 GCOM1H8Y6P7 765 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-206ENST00000475605 CYTH3O43739 400 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 AMHP03971 560 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 POLR2MP0CAP2 368 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 SMIM10L2AP0DMW4 78 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 SMIM10L2BP0DMW5 78 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 TGFB3P10600 412 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 KCNA5P22460 613 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 HTRA4P83105 476 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-206ENST00000475605 PLEKHG4Q58EX7 1191 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-206ENST00000475605 TUT1Q9H6E5 874 aaKnown RBP18.23■□□□□ 0.51
CDPF1-206ENST00000475605 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 TELO2Q9Y4R8 837 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 EMSYQ7Z589 1322 aa18.23■□□□□ 0.51
CDPF1-206ENST00000475605 LGALS2P05162 132 aa18.22■□□□□ 0.51
CDPF1-206ENST00000475605 CTSHP09668 335 aa18.22■□□□□ 0.51
CDPF1-206ENST00000475605 HOXC8P31273 242 aa18.22■□□□□ 0.51
CDPF1-206ENST00000475605 GRM4Q14833 912 aa18.22■□□□□ 0.51
CDPF1-206ENST00000475605 SAMD3Q8N6K7 520 aa18.22■□□□□ 0.51
CDPF1-206ENST00000475605 SP7Q8TDD2 431 aaPredicted RBP18.22■□□□□ 0.51
CDPF1-206ENST00000475605 DOCK5Q9H7D0 1870 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 PI4K2BG5E9Z4 385 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 UPP2O95045 317 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 IL9P15248 144 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 PDE4AP27815 886 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 MRPS9P82933 396 aaKnown RBP18.21■□□□□ 0.51
CDPF1-206ENST00000475605 LEXMQ3ZCV2 418 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 SETD4Q9NVD3 440 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 TAF6LQ9Y6J9 622 aa18.21■□□□□ 0.51
CDPF1-206ENST00000475605 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.2■□□□□ 0.5
CDPF1-206ENST00000475605 GPR37L1O60883 481 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 SEMA3FQ13275 785 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 EPC2Q52LR7 807 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 CYFIP1Q7L576 1253 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 TRIM50Q86XT4 487 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 FAM178BQ8IXR5 827 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 SEPT8Q92599 483 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 RTEL1Q9NZ71 1219 aa18.2■□□□□ 0.5
CDPF1-206ENST00000475605 PNMA6FA0A0J9YX94 578 aa18.19■□□□□ 0.5
CDPF1-206ENST00000475605 NOP56O00567 594 aaKnown RBP18.19■□□□□ 0.5
CDPF1-206ENST00000475605 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
CDPF1-206ENST00000475605 CYP21A2P08686 494 aa18.19■□□□□ 0.5
CDPF1-206ENST00000475605 PTH1RQ03431 593 aa18.19■□□□□ 0.5
CDPF1-206ENST00000475605 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
CDPF1-206ENST00000475605 GJD3Q8N144 294 aa18.19■□□□□ 0.5
CDPF1-206ENST00000475605 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
CDPF1-206ENST00000475605 MRPL38Q96DV4 380 aaKnown RBP18.19■□□□□ 0.5
CDPF1-206ENST00000475605 INPP4AQ96PE3 977 aaPredicted RBP18.19■□□□□ 0.5
CDPF1-206ENST00000475605 GPR20Q99678 358 aa18.19■□□□□ 0.5
CDPF1-206ENST00000475605 HCN4Q9Y3Q4 1203 aa18.19■□□□□ 0.5
CDPF1-206ENST00000475605 SPATA31C2B4DYI2 1134 aa18.18■□□□□ 0.5
CDPF1-206ENST00000475605 ICAM3P32942 547 aa18.18■□□□□ 0.5
CDPF1-206ENST00000475605 TROAPQ12815 778 aa18.18■□□□□ 0.5
CDPF1-206ENST00000475605 TRDNQ13061 729 aa18.18■□□□□ 0.5
CDPF1-206ENST00000475605 GPM6BQ13491 265 aa18.18■□□□□ 0.5
CDPF1-206ENST00000475605 UTP14CQ5TAP6 766 aaKnown RBP18.18■□□□□ 0.5
CDPF1-206ENST00000475605 PTCRAQ6ISU1 281 aaPredicted RBP18.18■□□□□ 0.5
CDPF1-206ENST00000475605 YME1L1Q96TA2 773 aa18.18■□□□□ 0.5
CDPF1-206ENST00000475605 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
CDPF1-206ENST00000475605 H3BNC9 293 aa18.17■□□□□ 0.5
CDPF1-206ENST00000475605 H3BQ06 376 aaPredicted RBP18.17■□□□□ 0.5
CDPF1-206ENST00000475605 GSPT1P15170 499 aaKnown RBP18.17■□□□□ 0.5
CDPF1-206ENST00000475605 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
CDPF1-206ENST00000475605 SP4Q02446 784 aa18.17■□□□□ 0.5
CDPF1-206ENST00000475605 NEDD9Q14511 834 aa18.17■□□□□ 0.5
CDPF1-206ENST00000475605 GNPTABQ3T906 1256 aa18.17■□□□□ 0.5
CDPF1-206ENST00000475605 METTL7BQ6UX53 244 aa18.17■□□□□ 0.5
CDPF1-206ENST00000475605 TMEM192Q8IY95 271 aa18.17■□□□□ 0.5
CDPF1-206ENST00000475605 FRMPD4Q14CM0 1322 aa18.17■□□□□ 0.5
CDPF1-206ENST00000475605 GRXCR2A6NFK2 248 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 SSTR3P32745 418 aaPredicted RBP18.16■□□□□ 0.5
CDPF1-206ENST00000475605 ADAM17P78536 824 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 TRAF1Q13077 416 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 WTAPQ15007 396 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 PTPROQ16827 1216 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 TCEAL5Q5H9L2 206 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 BANK1Q8NDB2 785 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 NEK9Q8TD19 979 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 LMBR1Q8WVP7 490 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 SAMD11Q96NU1 681 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 IFIH1Q9BYX4 1025 aaKnown RBP18.16■□□□□ 0.5
CDPF1-206ENST00000475605 ARIH1Q9Y4X5 557 aaPredicted RBP18.16■□□□□ 0.5
CDPF1-206ENST00000475605 NLRC5Q86WI3 1866 aa18.16■□□□□ 0.5
CDPF1-206ENST00000475605 ERICH2A1L162 156 aa18.15■□□□□ 0.5
CDPF1-206ENST00000475605 E7EWF7 191 aa18.15■□□□□ 0.5
CDPF1-206ENST00000475605 FIBPO43427 364 aa18.15■□□□□ 0.5
CDPF1-206ENST00000475605 CAND2O75155 1236 aa18.15■□□□□ 0.5
CDPF1-206ENST00000475605 ANTXR2P58335 489 aa18.15■□□□□ 0.5
CDPF1-206ENST00000475605 ARHGAP4P98171 946 aa18.15■□□□□ 0.5
CDPF1-206ENST00000475605 PPP4R2Q9NY27 417 aa18.15■□□□□ 0.5
CDPF1-206ENST00000475605 U3KPZ7 1027 aaPredicted RBP18.15■□□□□ 0.5
CDPF1-206ENST00000475605 STAM2O75886 525 aa18.14■□□□□ 0.49
CDPF1-206ENST00000475605 CHRNA1P02708 482 aa18.14■□□□□ 0.49
CDPF1-206ENST00000475605 GNAT1P11488 350 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms