RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 INPP4AQ96PE3 977 aaPredicted RBP20.65■□□□□ 0.9
PCGF3-209ENST00000475288 IL25Q9H293 177 aa20.65■□□□□ 0.9
PCGF3-209ENST00000475288 PNMA6FA0A0J9YX94 578 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 SMIM10L2AP0DMW4 78 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 SMIM10L2BP0DMW5 78 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 GNAT1P11488 350 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 TROAPQ12815 778 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 NEDD9Q14511 834 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 METTL7BQ6UX53 244 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 SEPT8Q92599 483 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 MRPL38Q96DV4 380 aaKnown RBP20.64■□□□□ 0.89
PCGF3-209ENST00000475288 PIGSQ96S52 555 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 HCN4Q9Y3Q4 1203 aa20.64■□□□□ 0.89
PCGF3-209ENST00000475288 U3KPZ7 1027 aaPredicted RBP20.64■□□□□ 0.89
PCGF3-209ENST00000475288 SPATA31C2B4DYI2 1134 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 PI4K2BG5E9Z4 385 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 CYTH3O43739 400 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 MRPS9P82933 396 aaKnown RBP20.63■□□□□ 0.89
PCGF3-209ENST00000475288 FAM117BQ6P1L5 589 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 HOMER1Q86YM7 354 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 MYOCDQ8IZQ8 938 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 APBB2Q92870 758 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 GPKOWQ92917 476 aaPredicted RBP eCLIP20.63■□□□□ 0.89
PCGF3-209ENST00000475288 TOP1MTQ969P6 601 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 C17orf80Q9BSJ5 609 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 RNPEPQ9H4A4 650 aa20.63■□□□□ 0.89
PCGF3-209ENST00000475288 ERICH2A1L162 156 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 NOP56O00567 594 aaKnown RBP20.62■□□□□ 0.89
PCGF3-209ENST00000475288 TREHO43280 583 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 FIBPO43427 364 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 PTPROQ16827 1216 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 PUS10Q3MIT2 529 aaKnown RBP20.62■□□□□ 0.89
PCGF3-209ENST00000475288 EPC2Q52LR7 807 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 FAM26DQ5JW98 314 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 XRRA1Q6P2D8 792 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 FCHSD1Q86WN1 690 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 FAM178BQ8IXR5 827 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 SENP7Q9BQF6 1050 aa20.62■□□□□ 0.89
PCGF3-209ENST00000475288 RALGAPA2Q2PPJ7 1873 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 IFIT3O14879 490 aaKnown RBP20.61■□□□□ 0.89
PCGF3-209ENST00000475288 SORBS3O60504 671 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 CYP21A2P08686 494 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 ADAM17P78536 824 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 COL19A1Q14993 1142 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 SART3Q15020 963 aaKnown RBP20.61■□□□□ 0.89
PCGF3-209ENST00000475288 TIGD5Q53EQ6 642 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.61■□□□□ 0.89
PCGF3-209ENST00000475288 KHSRPQ92945 711 aaKnown RBP eCLIP20.61■□□□□ 0.89
PCGF3-209ENST00000475288 MAP3K14Q99558 947 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 GPR20Q99678 358 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 C11orf16Q9NQ32 467 aa20.61■□□□□ 0.89
PCGF3-209ENST00000475288 ZNF215Q9UL58 517 aaPredicted RBP20.61■□□□□ 0.89
PCGF3-209ENST00000475288 H3BNC9 293 aa20.6■□□□□ 0.89
PCGF3-209ENST00000475288 HOXD11P31277 338 aaPredicted RBP20.6■□□□□ 0.89
PCGF3-209ENST00000475288 SEMA3FQ13275 785 aa20.6■□□□□ 0.89
PCGF3-209ENST00000475288 RPAINQ86UA6 219 aa20.6■□□□□ 0.89
PCGF3-209ENST00000475288 NEK9Q8TD19 979 aa20.6■□□□□ 0.89
PCGF3-209ENST00000475288 RUFY2Q8WXA3 655 aa20.6■□□□□ 0.89
PCGF3-209ENST00000475288 YME1L1Q96TA2 773 aa20.6■□□□□ 0.89
PCGF3-209ENST00000475288 CD320Q9NPF0 282 aa20.6■□□□□ 0.89
PCGF3-209ENST00000475288 NLRC5Q86WI3 1866 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 PIK3CDO00329 1044 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 KCNA5P22460 613 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 SMARCA1P28370 1054 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 WTAPQ15007 396 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 PCNX4Q63HM2 1172 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 CYFIP1Q7L576 1253 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
PCGF3-209ENST00000475288 NCOA7Q8NI08 942 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 SPZ1Q9BXG8 430 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 BCAS3Q9H6U6 928 aa20.59■□□□□ 0.89
PCGF3-209ENST00000475288 NRCAMQ92823 1304 aa20.58■□□□□ 0.89
PCGF3-209ENST00000475288 BAZ2BQ9UIF8 2168 aaKnown RBP20.58■□□□□ 0.89
PCGF3-209ENST00000475288 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.58■□□□□ 0.89
PCGF3-209ENST00000475288 GRXCR2A6NFK2 248 aa20.58■□□□□ 0.89
PCGF3-209ENST00000475288 TTC22Q5TAA0 569 aa20.58■□□□□ 0.89
PCGF3-209ENST00000475288 TMEM192Q8IY95 271 aa20.58■□□□□ 0.89
PCGF3-209ENST00000475288 GJD3Q8N144 294 aa20.58■□□□□ 0.89
PCGF3-209ENST00000475288 GIMAP8Q8ND71 665 aaPredicted RBP20.58■□□□□ 0.89
PCGF3-209ENST00000475288 ZFP91Q96JP5 570 aaPredicted RBP20.58■□□□□ 0.89
PCGF3-209ENST00000475288 SENP2Q9HC62 589 aa20.58■□□□□ 0.89
PCGF3-209ENST00000475288 SETD4Q9NVD3 440 aa20.58■□□□□ 0.89
PCGF3-209ENST00000475288 GSPT1P15170 499 aaKnown RBP20.57■□□□□ 0.88
PCGF3-209ENST00000475288 PTCRAQ6ISU1 281 aaPredicted RBP20.57■□□□□ 0.88
PCGF3-209ENST00000475288 CATIPQ7Z7H3 387 aa20.57■□□□□ 0.88
PCGF3-209ENST00000475288 BANK1Q8NDB2 785 aa20.57■□□□□ 0.88
PCGF3-209ENST00000475288 LMBR1Q8WVP7 490 aa20.57■□□□□ 0.88
PCGF3-209ENST00000475288 PABPC5Q96DU9 382 aaKnown RBP20.57■□□□□ 0.88
PCGF3-209ENST00000475288 DOCK5Q9H7D0 1870 aa20.57■□□□□ 0.88
PCGF3-209ENST00000475288 PRR33A8MZF0 331 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 E7EWF7 191 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 C5orf67F2Z3F1 127 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 CTSHP09668 335 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 PTH1RQ03431 593 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 GPM6BQ13491 265 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 TAF2Q6P1X5 1199 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 EXOC6Q8TAG9 804 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 IGDCC4Q8TDY8 1250 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 CUL5Q93034 780 aa20.56■□□□□ 0.88
PCGF3-209ENST00000475288 MTA3Q9BTC8 594 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms