RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ARIH2O95376 493 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 OR52Z1P0C646 297 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 ELNP15502 786 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 KCNA2P16389 499 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 NCLP19338 710 aaKnown RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 MARCKSP29966 332 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 PRPHP41219 470 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 CTCFP49711 727 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 SETQ01105 290 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 GRIN1Q05586 938 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 TRIM32Q13049 653 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 MTMR1Q13613 665 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 STK38Q15208 465 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 CALCRLQ16602 461 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 TRPV1Q8NER1 839 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 PXYLP1Q8TE99 480 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 FAM20AQ96MK3 541 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 SCAND2PQ9GZW5 306 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 ABHD16BQ9H3Z7 469 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 DDX41Q9UJV9 622 aaKnown RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 FBXO2Q9UK22 296 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-206ENST00000474648 CEP131Q9UPN4 1083 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
COL8A1-206ENST00000474648 IPO5O00410 1097 aaKnown RBP11.32□□□□□ -0.6
COL8A1-206ENST00000474648 LAD1O00515 517 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 PPP6R2O75170 966 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 PSMD10O75832 226 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 TGFB3P10600 412 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 TXKP42681 527 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 GNPTABQ3T906 1256 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 AXDND1Q5T1B0 1012 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-206ENST00000474648 MFSD14CQ5VZR4 134 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 ARL6IP4Q66PJ3 421 aaKnown RBP11.32□□□□□ -0.6
COL8A1-206ENST00000474648 B3GNT9Q6UX72 402 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 CDHR1Q96JP9 859 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 SPATA32Q96LK8 384 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 SENP7Q9BQF6 1050 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 ZNF577Q9BSK1 485 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 NRBP1Q9UHY1 535 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 VAV3Q9UKW4 847 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 PCDHA7Q9UN72 937 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 SRPRBQ9Y5M8 271 aaKnown RBP11.32□□□□□ -0.6
COL8A1-206ENST00000474648 PTCH2Q9Y6C5 1203 aa11.32□□□□□ -0.6
COL8A1-206ENST00000474648 ZNFX1Q9P2E3 1918 aaKnown RBP11.32□□□□□ -0.6
COL8A1-206ENST00000474648 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-206ENST00000474648 PTGS1P23219 599 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 ADCYAP1R1P41586 468 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 CACNB2Q08289 660 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-206ENST00000474648 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 LY6KQ17RY6 165 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 MAP3K21Q5TCX8 1036 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 IQSEC1Q6DN90 963 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 KCNV1Q6PIU1 500 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 DTHD1Q6ZMT9 781 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 SLFN12Q8IYM2 578 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
COL8A1-206ENST00000474648 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
COL8A1-206ENST00000474648 TMEM87AQ8NBN3 555 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 KCNG4Q8TDN1 519 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 SCFD2Q8WU76 684 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 RIT2Q99578 217 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 TTC12Q9H892 705 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-206ENST00000474648 TBC1D22BQ9NU19 505 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 PKD2L1Q9P0L9 805 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-206ENST00000474648 TELO2Q9Y4R8 837 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 ELP1O95163 1332 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 RBBP6Q7Z6E9 1792 aaKnown RBP11.31□□□□□ -0.6
COL8A1-206ENST00000474648 MYH7BA7E2Y1 1941 aa11.31□□□□□ -0.6
COL8A1-206ENST00000474648 ADCY6O43306 1168 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 MARCH6O60337 910 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 CCNE2O96020 404 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 TXNP10599 105 aaKnown RBP11.3□□□□□ -0.6
COL8A1-206ENST00000474648 CYBAP13498 195 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 SMPD1P17405 629 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 UBA1P22314 1058 aaKnown RBP11.3□□□□□ -0.6
COL8A1-206ENST00000474648 TECP42680 631 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 PDIA5Q14554 519 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 TTLL4Q14679 1199 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 CCDC144BQ3MJ40 725 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 LRCH2Q5VUJ6 765 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 CTU1Q7Z7A3 348 aaKnown RBP11.3□□□□□ -0.6
COL8A1-206ENST00000474648 IGSF22Q8N9C0 903 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 COPS5Q92905 334 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 FERMT2Q96AC1 680 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 CSRNP2Q9H175 543 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 UNC45AQ9H3U1 944 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 PCDHA12Q9UN75 941 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 NFASCO94856 1347 aa11.3□□□□□ -0.6
COL8A1-206ENST00000474648 MGAMO43451 1857 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 VWA3AA6NCI4 1184 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 EML1O00423 815 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 CUTAO60888 179 aa11.29□□□□□ -0.6
COL8A1-206ENST00000474648 GADD45BO75293 160 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms