RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CALRP27797 417 aaKnown RBP20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 CNNM4Q6P4Q7 775 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 CRELD2Q6UXH1 353 aaPredicted RBP20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 MDM1Q8TC05 714 aa20.43■□□□□ 0.86
ECHDC1-214ENST00000474289 MROH5Q6ZUA9 1318 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 IL2RBP14784 551 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 CABP7Q86V35 215 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 CCDC197Q8NCU1 140 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 TCP11Q8WWU5 503 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 PRDM11Q9NQV5 511 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 SWAP70Q9UH65 585 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 PCDHA4Q9UN74 947 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 SLC12A4Q9UP95 1085 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 BHMG1C9JSJ3 638 aaPredicted RBP20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 BRD2P25440 801 aaKnown RBP20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 MTMR3Q13615 1198 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 KRT71Q3SY84 523 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 COBLL1Q53SF7 1204 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 ERMARDQ5T6L9 678 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 EGFL6Q8IUX8 553 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 SCFD2Q8WU76 684 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 PACSIN1Q9BY11 444 aa20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 LUC7LQ9NQ29 371 aaKnown RBP20.42■□□□□ 0.86
ECHDC1-214ENST00000474289 CCDC194A0A1B0GVG4 234 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 BCAMP50895 628 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 KCNMA1Q12791 1236 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 INF2Q27J81 1249 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 CHADLQ6NUI6 762 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 CCDC63Q8NA47 563 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 XPO6Q96QU8 1125 aaKnown RBP20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 PSMD1Q99460 953 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 C15orf41Q9Y2V0 281 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 L3MBTL1Q9Y468 752 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 MYH4Q9Y623 1939 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 PDE8AO60658 829 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 SERPING1P05155 500 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 CLTAP09496 248 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 KIAA0753Q2KHM9 967 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 ZNF483Q8TF39 744 aaPredicted RBP20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 TAF4BQ92750 862 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 EDEM3Q9BZQ6 932 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 BATF3Q9NR55 127 aa20.41■□□□□ 0.86
ECHDC1-214ENST00000474289 ABCB11O95342 1321 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 TOGARAM1Q9Y4F4 1720 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 SART1O43290 800 aaKnown RBP20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 CTNND1O60716 968 aaKnown RBP20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 GCKP35557 465 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 TMC3Q7Z5M5 1100 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 PNMA8AQ86V59 439 aaPredicted RBP20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 TBC1D5Q92609 795 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 SPDL1Q96EA4 605 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 AP1M1Q9BXS5 423 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 FAM129AQ9BZQ8 928 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 SHANK3Q9BYB0 1731 aa20.4■□□□□ 0.86
ECHDC1-214ENST00000474289 M0R2N6 131 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 ANP32DO95626 131 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 STARD3NLO95772 234 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 RIPK1Q13546 671 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 SLC18A3Q16572 532 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 SFMBT2Q5VUG0 894 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 LMBR1Q8WVP7 490 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 PIGBQ92521 554 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 ANKS1AQ92625 1134 aa20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 ZNF317Q96PQ6 595 aaPredicted RBP20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 DDX47Q9H0S4 455 aaKnown RBP20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 CNOT10Q9H9A5 744 aaKnown RBP20.39■□□□□ 0.86
ECHDC1-214ENST00000474289 A0A087X0T9 212 aa20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 MAGEB6P1A0A0J9YX57 407 aa20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 CES2O00748 559 aa20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 GSTA1P08263 222 aa20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 FAM228BP0C875 321 aa20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 RPS6KA1Q15418 735 aa20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 BZW1Q7L1Q6 419 aaKnown RBP20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 TANGO6Q9C0B7 1094 aa20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 TCP11L1Q9NUJ3 509 aa20.39■□□□□ 0.85
ECHDC1-214ENST00000474289 DAPK3O43293 454 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 NOL4O94818 638 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 SF3A3Q12874 501 aaKnown RBP eCLIP20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 FAM83BQ5T0W9 1011 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 LRRC55Q6ZSA7 311 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 ANKS4BQ8N8V4 417 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 ARMC2Q8NEN0 867 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 TLCD1Q96CP7 247 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 GOLPH3Q9H4A6 298 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 CEP72Q9P209 647 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 ATP6V0A2Q9Y487 856 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 F8VZ95 297 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 CEP104O60308 925 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 LRP5O75197 1615 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 PRPHP41219 470 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 TBC1D1Q86TI0 1168 aaPredicted RBP20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 PCDHA6Q9UN73 950 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 TRPC6Q9Y210 931 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 PCDHA8Q9Y5H6 950 aa20.38■□□□□ 0.85
ECHDC1-214ENST00000474289 A0A0G2JS52 829 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 LAD1O00515 517 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 KIF4AO95239 1232 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 FGRP09769 529 aa20.37■□□□□ 0.85
ECHDC1-214ENST00000474289 INHBEP58166 350 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms