RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 ATP6V0A1Q93050 837 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 RAD9AQ99638 391 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 USP26Q9BXU7 913 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 RSPH10B2B2RC85 870 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 RBAK-RBAKDNI3L0D1 243 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 FIBPO43427 364 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 RSPH10BP0C881 870 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 BMP1P13497 986 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 HOXC8P31273 242 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 TFF2Q03403 129 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 SEMA3FQ13275 785 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 AAK1Q2M2I8 961 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 USP17L6PQ6QN14 398 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 CYFIP1Q7L576 1253 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 TMTC2Q8N394 836 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 CUL5Q93034 780 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 UHRF1Q96T88 793 aaPredicted RBP28.6■■■□□ 2.17
PKD1-211ENST00000474088 LZTS2Q9BRK4 669 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 RNPEPQ9H4A4 650 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 EMSYQ7Z589 1322 aa28.6■■■□□ 2.17
PKD1-211ENST00000474088 PIK3CDO00329 1044 aa28.59■■■□□ 2.17
PKD1-211ENST00000474088 MEIS2O14770 477 aa28.59■■■□□ 2.17
PKD1-211ENST00000474088 PRC1O43663 620 aa28.59■■■□□ 2.17
PKD1-211ENST00000474088 LPXNO60711 386 aa28.59■■■□□ 2.17
PKD1-211ENST00000474088 SMIM10L2AP0DMW4 78 aa28.59■■■□□ 2.17
PKD1-211ENST00000474088 SMIM10L2BP0DMW5 78 aa28.59■■■□□ 2.17
PKD1-211ENST00000474088 GPR20Q99678 358 aa28.59■■■□□ 2.17
PKD1-211ENST00000474088 SEC63Q9UGP8 760 aaKnown RBP28.59■■■□□ 2.17
PKD1-211ENST00000474088 MCM5P33992 734 aa28.58■■■□□ 2.17
PKD1-211ENST00000474088 GNAQP50148 359 aa28.58■■■□□ 2.17
PKD1-211ENST00000474088 PCNX4Q63HM2 1172 aa28.58■■■□□ 2.17
PKD1-211ENST00000474088 NFXL1Q6ZNB6 911 aa28.58■■■□□ 2.17
PKD1-211ENST00000474088 DBF4BQ8NFT6 615 aa28.58■■■□□ 2.17
PKD1-211ENST00000474088 TMEM87BQ96K49 555 aa28.58■■■□□ 2.17
PKD1-211ENST00000474088 TREHO43280 583 aa28.57■■■□□ 2.16
PKD1-211ENST00000474088 XRRA1Q6P2D8 792 aa28.57■■■□□ 2.16
PKD1-211ENST00000474088 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.57■■■□□ 2.16
PKD1-211ENST00000474088 SRBD1Q8N5C6 995 aaKnown RBP28.57■■■□□ 2.16
PKD1-211ENST00000474088 SENP7Q9BQF6 1050 aa28.57■■■□□ 2.16
PKD1-211ENST00000474088 LSG1Q9H089 658 aaKnown RBP28.57■■■□□ 2.16
PKD1-211ENST00000474088 CCDC69A6NI79 296 aa28.56■■■□□ 2.16
PKD1-211ENST00000474088 SH2B2O14492 632 aaPredicted RBP28.56■■■□□ 2.16
PKD1-211ENST00000474088 PLEKHA8P1O95397 391 aa28.56■■■□□ 2.16
PKD1-211ENST00000474088 FAM117BQ6P1L5 589 aa28.56■■■□□ 2.16
PKD1-211ENST00000474088 COG5Q9UP83 839 aa28.56■■■□□ 2.16
PKD1-211ENST00000474088 KCNQ1P51787 676 aa28.55■■■□□ 2.16
PKD1-211ENST00000474088 ERVK-21P61565 698 aa28.55■■■□□ 2.16
PKD1-211ENST00000474088 MKRN4PQ13434 485 aaPredicted RBP28.55■■■□□ 2.16
PKD1-211ENST00000474088 PLEKHG4Q58EX7 1191 aa28.55■■■□□ 2.16
PKD1-211ENST00000474088 NLRX1Q86UT6 975 aa28.55■■■□□ 2.16
PKD1-211ENST00000474088 CMTR1Q8N1G2 835 aaKnown RBP28.55■■■□□ 2.16
PKD1-211ENST00000474088 TGS1Q96RS0 853 aaKnown RBP28.55■■■□□ 2.16
PKD1-211ENST00000474088 SETD4Q9NVD3 440 aa28.55■■■□□ 2.16
PKD1-211ENST00000474088 LMCD1Q9NZU5 365 aa28.55■■■□□ 2.16
PKD1-211ENST00000474088 TELO2Q9Y4R8 837 aa28.55■■■□□ 2.16
PKD1-211ENST00000474088 LINC01553A4QN01 128 aa28.54■■■□□ 2.16
PKD1-211ENST00000474088 SLC27A2O14975 620 aa28.54■■■□□ 2.16
PKD1-211ENST00000474088 GNAT1P11488 350 aa28.54■■■□□ 2.16
PKD1-211ENST00000474088 LIFRP42702 1097 aa28.54■■■□□ 2.16
PKD1-211ENST00000474088 COL9A3Q14050 684 aaPredicted RBP28.54■■■□□ 2.16
PKD1-211ENST00000474088 SUGCTQ9HAC7 445 aa28.54■■■□□ 2.16
PKD1-211ENST00000474088 MTUS1Q9ULD2 1270 aa28.54■■■□□ 2.16
PKD1-211ENST00000474088 PRRC2BQ5JSZ5 2229 aaKnown RBP28.53■■■□□ 2.16
PKD1-211ENST00000474088 CAND2O75155 1236 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 AMHP03971 560 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 CALM1P0DP23 149 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 CALM2P0DP24 149 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 CALM3P0DP25 149 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 RXRAP19793 462 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 UTP14CQ5TAP6 766 aaKnown RBP28.53■■■□□ 2.16
PKD1-211ENST00000474088 TRIM50Q86XT4 487 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 GDPD5Q8WTR4 605 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 ESYT1Q9BSJ8 1104 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 PSTPIP2Q9H939 334 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 ZNF215Q9UL58 517 aaPredicted RBP28.53■■■□□ 2.16
PKD1-211ENST00000474088 INSL6Q9Y581 213 aa28.53■■■□□ 2.16
PKD1-211ENST00000474088 SP4Q02446 784 aa28.52■■■□□ 2.16
PKD1-211ENST00000474088 NECTIN1Q15223 517 aa28.52■■■□□ 2.16
PKD1-211ENST00000474088 GIMAP8Q8ND71 665 aaPredicted RBP28.52■■■□□ 2.16
PKD1-211ENST00000474088 HLA-CQ95604 372 aa28.52■■■□□ 2.16
PKD1-211ENST00000474088 NECAB3Q96P71 396 aaPredicted RBP28.52■■■□□ 2.16
PKD1-211ENST00000474088 ADAM17P78536 824 aa28.51■■■□□ 2.15
PKD1-211ENST00000474088 CREB3L3Q68CJ9 461 aa28.51■■■□□ 2.15
PKD1-211ENST00000474088 MYOCDQ8IZQ8 938 aa28.51■■■□□ 2.15
PKD1-211ENST00000474088 SEPT8Q92599 483 aa28.51■■■□□ 2.15
PKD1-211ENST00000474088 GPRASP2Q96D09 838 aa28.51■■■□□ 2.15
PKD1-211ENST00000474088 OSBPL7Q9BZF2 842 aa28.51■■■□□ 2.15
PKD1-211ENST00000474088 ATP9AO75110 1047 aa28.5■■■□□ 2.15
PKD1-211ENST00000474088 CTSHP09668 335 aa28.5■■■□□ 2.15
PKD1-211ENST00000474088 HTRA4P83105 476 aaPredicted RBP28.5■■■□□ 2.15
PKD1-211ENST00000474088 SLC12A7Q9Y666 1083 aa28.5■■■□□ 2.15
PKD1-211ENST00000474088 DOCK5Q9H7D0 1870 aa28.5■■■□□ 2.15
PKD1-211ENST00000474088 TTC28Q96AY4 2481 aa28.5■■■□□ 2.15
PKD1-211ENST00000474088 COL4A4P53420 1690 aaPredicted RBP28.49■■■□□ 2.15
PKD1-211ENST00000474088 ARHGAP4P98171 946 aa28.49■■■□□ 2.15
PKD1-211ENST00000474088 RAB11FIP4Q86YS3 637 aa28.49■■■□□ 2.15
PKD1-211ENST00000474088 CCDC82Q8N4S0 544 aa28.49■■■□□ 2.15
PKD1-211ENST00000474088 FANCBQ8NB91 859 aa28.49■■■□□ 2.15
PKD1-211ENST00000474088 LMBR1Q8WVP7 490 aa28.49■■■□□ 2.15
PKD1-211ENST00000474088 CDHR1Q96JP9 859 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms