RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 COG5Q9UP83 839 aa13□□□□□ -0.33
ACTB-209ENST00000473257 C17orf102A2RUQ5 167 aa12.99□□□□□ -0.33
ACTB-209ENST00000473257 PPFIA4O75335 1185 aa12.99□□□□□ -0.33
ACTB-209ENST00000473257 ANTXR2P58335 489 aa12.99□□□□□ -0.33
ACTB-209ENST00000473257 IRX6P78412 446 aaPredicted RBP12.99□□□□□ -0.33
ACTB-209ENST00000473257 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
ACTB-209ENST00000473257 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
ACTB-209ENST00000473257 CYFIP1Q7L576 1253 aa12.99□□□□□ -0.33
ACTB-209ENST00000473257 RAB11FIP4Q86YS3 637 aa12.99□□□□□ -0.33
ACTB-209ENST00000473257 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
ACTB-209ENST00000473257 hCG_1642624A0A1W2PR95 340 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 H3BRB1 525 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 CSPG5O95196 566 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 KCNA5P22460 613 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 USP17L6PQ6QN14 398 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
ACTB-209ENST00000473257 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 ZBTB10Q96DT7 871 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 RNPEPQ9H4A4 650 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 TUT1Q9H6E5 874 aaKnown RBP12.98□□□□□ -0.33
ACTB-209ENST00000473257 UBE2ZQ9H832 354 aaPredicted RBP12.98□□□□□ -0.33
ACTB-209ENST00000473257 C11orf16Q9NQ32 467 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 MICAL3Q7RTP6 2002 aa12.98□□□□□ -0.33
ACTB-209ENST00000473257 SIP14410 1827 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 PNMA6FA0A0J9YX94 578 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.97□□□□□ -0.33
ACTB-209ENST00000473257 E7EWF7 191 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 AMHP03971 560 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 RXRAP19793 462 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 CHMLP26374 656 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 TROAPQ12815 778 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 WTAPQ15007 396 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 PLEKHG4Q58EX7 1191 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 RUFY4Q6ZNE9 571 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 GPR20Q99678 358 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 MAF1Q9H063 256 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 PKD2L1Q9P0L9 805 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 MUC6Q6W4X9 2439 aa12.97□□□□□ -0.33
ACTB-209ENST00000473257 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
ACTB-209ENST00000473257 H3BQ06 376 aaPredicted RBP12.96□□□□□ -0.33
ACTB-209ENST00000473257 NOP56O00567 594 aaKnown RBP12.96□□□□□ -0.33
ACTB-209ENST00000473257 PLEKHA8P1O95397 391 aa12.96□□□□□ -0.33
ACTB-209ENST00000473257 IL9P15248 144 aa12.96□□□□□ -0.33
ACTB-209ENST00000473257 HOXC8P31273 242 aa12.96□□□□□ -0.33
ACTB-209ENST00000473257 PLA2G5P39877 138 aa12.96□□□□□ -0.33
ACTB-209ENST00000473257 HTRA4P83105 476 aaPredicted RBP12.96□□□□□ -0.33
ACTB-209ENST00000473257 ARHGAP4P98171 946 aa12.96□□□□□ -0.33
ACTB-209ENST00000473257 TRDNQ13061 729 aa12.96□□□□□ -0.33
ACTB-209ENST00000473257 EP400NLQ6ZTU2 488 aa12.96□□□□□ -0.33
ACTB-209ENST00000473257 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.96□□□□□ -0.33
ACTB-209ENST00000473257 INPP4AQ96PE3 977 aaPredicted RBP12.96□□□□□ -0.33
ACTB-209ENST00000473257 WDFY4Q6ZS81 3184 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 PARNO95453 639 aaKnown RBP12.95□□□□□ -0.34
ACTB-209ENST00000473257 MARK3P27448 753 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 NT5C2P49902 561 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 EPC2Q52LR7 807 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 RALYLQ86SE5 291 aaKnown RBP12.95□□□□□ -0.34
ACTB-209ENST00000473257 IGDCC4Q8TDY8 1250 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 SEPT8Q92599 483 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 FAM122AQ96E09 287 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 YME1L1Q96TA2 773 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 C1QTNF1Q9BXJ1 281 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 INSL6Q9Y581 213 aa12.95□□□□□ -0.34
ACTB-209ENST00000473257 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
ACTB-209ENST00000473257 FRMPD4Q14CM0 1322 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 EMSYQ7Z589 1322 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.94□□□□□ -0.34
ACTB-209ENST00000473257 ERICH2A1L162 156 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 EFCAB14O75071 495 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 ATP9AO75110 1047 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 CHRNA1P02708 482 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 TGFB3P10600 412 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 GHRP10912 638 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 UBE2SQ16763 222 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 TCEAL5Q5H9L2 206 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 METTL7BQ6UX53 244 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 CATIPQ7Z7H3 387 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 MB21D2Q8IYB1 491 aaPredicted RBP12.94□□□□□ -0.34
ACTB-209ENST00000473257 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
ACTB-209ENST00000473257 IFIH1Q9BYX4 1025 aaKnown RBP12.94□□□□□ -0.34
ACTB-209ENST00000473257 LY9Q9HBG7 655 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
ACTB-209ENST00000473257 LMCD1Q9NZU5 365 aa12.94□□□□□ -0.34
ACTB-209ENST00000473257 MEIS2O14770 477 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 FIBPO43427 364 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 ICAM3P32942 547 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 GPM6BQ13491 265 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 AAMPQ13685 434 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 CLUL1Q15846 466 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 GNPTABQ3T906 1256 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 TMEM31Q5JXX7 168 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 PTCRAQ6ISU1 281 aaPredicted RBP12.93□□□□□ -0.34
ACTB-209ENST00000473257 TMEM192Q8IY95 271 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 ZNF654Q8IZM8 581 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 CCDC82Q8N4S0 544 aa12.93□□□□□ -0.34
ACTB-209ENST00000473257 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms