RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 DNERQ8NFT8 737 aa10.43□□□□□ -0.74
SMC4-214ENST00000472991 CCDC12Q8WUD4 166 aaPredicted RBP10.43□□□□□ -0.74
SMC4-214ENST00000472991 ABHD8Q96I13 439 aa10.43□□□□□ -0.74
SMC4-214ENST00000472991 PSTPIP2Q9H939 334 aa10.43□□□□□ -0.74
SMC4-214ENST00000472991 RIC8AQ9NPQ8 531 aa10.43□□□□□ -0.74
SMC4-214ENST00000472991 MAP3K20Q9NYL2 800 aaKnown RBP10.43□□□□□ -0.74
SMC4-214ENST00000472991 BRCA2P51587 3418 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 ESYT2A0FGR8 921 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 ASB14A6NK59 587 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 PIK3CDO00329 1044 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 SNAI1O95863 264 aaPredicted RBP10.42□□□□□ -0.74
SMC4-214ENST00000472991 CYBAP13498 195 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 EIF2AK2P19525 551 aaKnown RBP10.42□□□□□ -0.74
SMC4-214ENST00000472991 CCND3P30281 292 aaPredicted RBP10.42□□□□□ -0.74
SMC4-214ENST00000472991 PRAMEF19Q5SWL8 479 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 ARHGEF16Q5VV41 709 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 MSL3Q8N5Y2 521 aaKnown RBP10.42□□□□□ -0.74
SMC4-214ENST00000472991 TRPV1Q8NER1 839 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 RMDN3Q96TC7 470 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 LLPHQ9BRT6 129 aaKnown RBP10.42□□□□□ -0.74
SMC4-214ENST00000472991 ALG1Q9BT22 464 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 ZMYND12Q9H0C1 365 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 UNC93B1Q9H1C4 597 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 SH3GLB2Q9NR46 395 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 PXMP2Q9NR77 195 aa10.42□□□□□ -0.74
SMC4-214ENST00000472991 ZHX1Q9UKY1 873 aaPredicted RBP10.42□□□□□ -0.74
SMC4-214ENST00000472991 FRMPD4Q14CM0 1322 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 LOC102724159A0A0B4J2E5 919 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 SPDYE3A6NKU9 549 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 ADAMTS3O15072 1205 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 CCL5P13501 91 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 EDNRBP24530 442 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 MRPL12P52815 198 aaKnown RBP10.41□□□□□ -0.74
SMC4-214ENST00000472991 NLRP5P59047 1200 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 HMGN5P82970 282 aaKnown RBP10.41□□□□□ -0.74
SMC4-214ENST00000472991 PDE4DQ08499 809 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 PGM5Q15124 567 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 PWP2Q15269 919 aaKnown RBP10.41□□□□□ -0.74
SMC4-214ENST00000472991 EEPD1Q7L9B9 569 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 FBXO16Q8IX29 292 aaPredicted RBP10.41□□□□□ -0.74
SMC4-214ENST00000472991 IL31RAQ8NI17 732 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 RASGRP4Q8TDF6 673 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 MORC4Q8TE76 937 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 NSUN6Q8TEA1 469 aaKnown RBP10.41□□□□□ -0.74
SMC4-214ENST00000472991 WASF1Q92558 559 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 PGBD1Q96JS3 809 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 MPHOSPH6Q99547 160 aaKnown RBP10.41□□□□□ -0.74
SMC4-214ENST00000472991 PDCD2LQ9BRP1 358 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 KATNBL1Q9H079 304 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.41□□□□□ -0.741e-147■■■■■ 345.5
SMC4-214ENST00000472991 RNF208Q9H0X6 261 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 C6orf50Q9HD87 102 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 HMX1Q9NP08 348 aaPredicted RBP10.41□□□□□ -0.74
SMC4-214ENST00000472991 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 TMEM260Q9NX78 707 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 KCNJ14Q9UNX9 436 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 CNPY2Q9Y2B0 182 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 ALPK3Q96L96 1907 aa10.41□□□□□ -0.74
SMC4-214ENST00000472991 RPTORQ8N122 1335 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 MYH9P35579 1960 aaKnown RBP10.4□□□□□ -0.74
SMC4-214ENST00000472991 B4DLN1 442 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.74
SMC4-214ENST00000472991 ZNF865P0CJ78 1059 aaPredicted RBP10.4□□□□□ -0.74
SMC4-214ENST00000472991 MYCLP12524 364 aaPredicted RBP10.4□□□□□ -0.74
SMC4-214ENST00000472991 XBP1P17861 261 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 CNGA1P29973 690 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 GNA11P29992 359 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 CLK2P49760 499 aaKnown RBP10.4□□□□□ -0.74
SMC4-214ENST00000472991 ACVR2BQ13705 512 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 JAKMIP3Q5VZ66 844 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 HSCBQ8IWL3 235 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 REXO1Q8N1G1 1221 aaKnown RBP10.4□□□□□ -0.74
SMC4-214ENST00000472991 SNX21Q969T3 373 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 IWS1Q96ST2 819 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 ANO3Q9BYT9 981 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 GLT8D2Q9H1C3 349 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 ABHD16BQ9H3Z7 469 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 PCDHA6Q9UN73 950 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 PCDHA8Q9Y5H6 950 aa10.4□□□□□ -0.74
SMC4-214ENST00000472991 MOXD2PA6NHM9 499 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 SEPT4O43236 478 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 NR3C2P08235 984 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 CCND2P30279 289 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 AP3B2Q13367 1082 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 CUL4AQ13619 759 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 NPY5RQ15761 445 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 ANO1Q5XXA6 986 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 TEX2Q8IWB9 1127 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 BLIDQ8IZY5 108 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 FAM177A1Q8N128 213 aaPredicted RBP10.39□□□□□ -0.75
SMC4-214ENST00000472991 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 DAGLBQ8NCG7 672 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 BICD2Q8TD16 824 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 LENG1Q96BZ8 264 aaPredicted RBP10.39□□□□□ -0.75
SMC4-214ENST00000472991 MRGPRX2Q96LB1 330 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 DEFB118Q96PH6 123 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 PHF20Q9BVI0 1012 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 EHMT1Q9H9B1 1298 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 VTA1Q9NP79 307 aa10.39□□□□□ -0.75
SMC4-214ENST00000472991 PAK6Q9NQU5 681 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms