RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CCL23P55773 120 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 ICA1Q05084 483 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 PTK2Q05397 1052 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 APOBRQ0VD83 1088 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 ACVR2BQ13705 512 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 SBK1Q52WX2 424 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 CYB5R4Q7L1T6 521 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 CCDC83Q8IWF9 413 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 DYNLL2Q96FJ2 89 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 SNX27Q96L92 541 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 ZSCAN31Q96LW9 406 aaPredicted RBP7.4□□□□□ -1.22
HDAC1-205ENST00000472928 KATNBL1Q9H079 304 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 ALDH8A1Q9H2A2 487 aaPredicted RBP7.4□□□□□ -1.22
HDAC1-205ENST00000472928 MTIF3Q9H2K0 278 aaKnown RBP7.4□□□□□ -1.22
HDAC1-205ENST00000472928 HIPK3Q9H422 1215 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 INCENPQ9NQS7 918 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 PPP1R9AQ9ULJ8 1098 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 TPCN1Q9ULQ1 816 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 NAP1L2Q9ULW6 460 aaPredicted RBP7.4□□□□□ -1.22
HDAC1-205ENST00000472928 COG5Q9UP83 839 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 USTQ9Y2C2 406 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 SLC4A7Q9Y6M7 1214 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 ASTN1O14525 1302 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 GRIN2DO15399 1336 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 MYO7AQ13402 2215 aa7.4□□□□□ -1.23
HDAC1-205ENST00000472928 SH2B2O14492 632 aaPredicted RBP7.39□□□□□ -1.23
HDAC1-205ENST00000472928 TLR3O15455 904 aaKnown RBP7.39□□□□□ -1.23
HDAC1-205ENST00000472928 ORC4O43929 436 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 LPXNO60711 386 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 PRDM1O75626 825 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 CA3P07451 260 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 PCP11498 1178 aaKnown RBP7.39□□□□□ -1.23
HDAC1-205ENST00000472928 ATP2A2P16615 1042 aaKnown RBP7.39□□□□□ -1.23
HDAC1-205ENST00000472928 COPB2P35606 906 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 MRE11P49959 708 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 BEX3Q00994 111 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 EXOSC10Q01780 885 aaKnown RBP7.39□□□□□ -1.23
HDAC1-205ENST00000472928 PDE4CQ08493 712 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 ST3GAL1Q11201 340 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 STK3Q13188 491 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 CUL4AQ13619 759 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 TTLL4Q14679 1199 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 SART3Q15020 963 aaKnown RBP7.39□□□□□ -1.23
HDAC1-205ENST00000472928 ME3Q16798 604 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 CCDC144BQ3MJ40 725 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 TMEM67Q5HYA8 995 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 GNASQ5JWF2 1037 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 C12orf60Q5U649 245 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 NECAB1Q8N987 351 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 ZNF516Q92618 1163 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 ESR2Q92731 530 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 VTI1AQ96AJ9 217 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 UBAC1Q9BSL1 405 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 AGXT2Q9BYV1 514 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 TRPV6Q9H1D0 765 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 CERS4Q9HA82 394 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 IL21Q9HBE4 155 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 ARHGEF10LQ9HCE6 1279 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.39□□□□□ -1.23
HDAC1-205ENST00000472928 RIPK3Q9Y572 518 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 TET1Q8NFU7 2136 aa7.39□□□□□ -1.23
HDAC1-205ENST00000472928 TNKSO95271 1327 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 KLF18A0A0U1RQI7 1052 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.38□□□□□ -1.23
HDAC1-205ENST00000472928 PRR33A8MZF0 331 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 IFIT3O14879 490 aaKnown RBP7.38□□□□□ -1.23
HDAC1-205ENST00000472928 B4GALT4O60513 344 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 RANBP6O60518 1105 aaKnown RBP7.38□□□□□ -1.23
HDAC1-205ENST00000472928 ATG7O95352 703 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 PTGS1P23219 599 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 TAP1Q03518 808 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 PDE4BQ07343 736 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 FAM83BQ5T0W9 1011 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 PTCRAQ6ISU1 281 aaPredicted RBP7.38□□□□□ -1.23
HDAC1-205ENST00000472928 CXCL17Q6UXB2 119 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 NFXL1Q6ZNB6 911 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 ARMCX2Q7L311 632 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 SPRED2Q7Z698 418 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 GTF3C6Q969F1 213 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 INTS4Q96HW7 963 aaKnown RBP7.38□□□□□ -1.23
HDAC1-205ENST00000472928 SCLYQ96I15 445 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 TMEM87BQ96K49 555 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 AGBL1Q96MI9 1066 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 TEX13BQ9BXU2 312 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 SLC6A16Q9GZN6 736 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 ABHD16BQ9H3Z7 469 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 SH2D4AQ9H788 454 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 LY9Q9HBG7 655 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 FAM186AA6NE01 2351 aa7.38□□□□□ -1.23
HDAC1-205ENST00000472928 PLIN4Q96Q06 1357 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 ERICH2A1L162 156 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 TSPY2A6NKD2 308 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 PFKFB2O60825 505 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 EEF2P13639 858 aaKnown RBP7.37□□□□□ -1.23
HDAC1-205ENST00000472928 DDIT3P35638 169 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 PTPN5P54829 565 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 NHLH1Q02575 133 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 GRB10Q13322 594 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 ITGA7Q13683 1181 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 WTAPQ15007 396 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms